RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 QRFPRQ96P65 431 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 HHIPQ96QV1 700 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 OR4K3Q96R72 315 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 OR52E6Q96RD3 313 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 GAS2L1Q99501 681 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 KCTD14Q9BQ13 255 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 AIF1LQ9BQI0 150 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 CENPKQ9BS16 269 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 APOOQ9BUR5 198 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 SPATA9Q9BWV2 254 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PHF7Q9BWX1 381 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 BTBD1Q9H0C5 482 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 RHBGQ9H310 441 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 NANOGQ9H9S0 305 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 KCNK12Q9HB15 430 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 POLMQ9NP87 494 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 FARSBQ9NSD9 589 aaKnown RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 CCM2LQ9NUG4 571 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 ATAD3AQ9NVI7 634 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 CMTM6Q9NX76 183 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 MMP17Q9ULZ9 603 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 CORO2BQ9UQ03 480 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 DMTF1Q9Y222 760 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TMEM98Q9Y2Y6 226 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 AP4S1Q9Y587 144 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 HS3ST3A1Q9Y663 406 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 GMEB1Q9Y692 573 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 COLEC10Q9Y6Z7 277 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 CKAP5Q14008 2032 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PIKFYVEQ9Y2I7 2098 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 ASPDHA6ND91 283 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 PRR19A6NJB7 356 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 CHURC1-FNTBB4DL54 471 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 PRAMEF4O60810 478 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 CEACAM5P06731 702 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 SRFP11831 508 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 CD1EP15812 388 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 IL1RNP18510 177 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 SDC1P18827 310 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 HNRNPA2B1P22626 353 aaKnown RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 OXTRP30559 389 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 AKT2P31751 481 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 HPCAL1P37235 193 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 RAB28P51157 221 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 CCR5P51681 352 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 CCR8P51685 355 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 DGKEP52429 567 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 MRPS22P82650 360 aaKnown RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 LIPEQ05469 1076 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 FGL2Q14314 439 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 SLBPQ14493 270 aaKnown RBP eCLIP7.66□□□□□ -1.18
VMA21-203ENST00000477649 NFATC4Q14934 902 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 TRIP10Q15642 601 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 UAP1L1Q3KQV9 507 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 PUS10Q3MIT2 529 aaKnown RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 FAM174BQ3ZCQ3 159 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 PYCR3Q53H96 274 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 PAGE3Q5JUK9 113 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 C6orf10Q5SRN2 563 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 THEMIS2Q5TEJ8 643 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 PRAMEF9Q5VWM5 478 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 KIAA1211LQ6NV74 962 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 IRGCQ6NXR0 463 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 ERICH5Q6P6B1 374 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 DOK6Q6PKX4 331 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 XKR5Q6UX68 686 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 TMPRSS11BQ86T26 416 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 SYT12Q8IV01 421 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 APLFQ8IW19 511 aaPredicted RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 RIMKLAQ8IXN7 391 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 LILRA3Q8N6C8 439 aaPredicted RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 PACRGLQ8N7B6 248 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 ICA1LQ8NDH6 482 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 CHTF18Q8WVB6 975 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 ZFPM2Q8WW38 1151 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 FAM3CQ92520 227 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 GTF2H4Q92759 462 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 NEIL2Q969S2 332 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 VPS33AQ96AX1 596 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 C11orf24Q96F05 449 aaPredicted RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 MRGPRX1Q96LB2 322 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 APOLD1Q96LR9 279 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 TMEM74Q96NL1 305 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 GBP5Q96PP8 586 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 OR2M4Q96R27 311 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 NR1H4Q96RI1 486 aaPredicted RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 ECSITQ9BQ95 431 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 GORASP2Q9H8Y8 452 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 MBNL1Q9NR56 388 aaKnown RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 FAM8A1Q9UBU6 413 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 MRPS17Q9Y2R5 130 aaKnown RBP7.66□□□□□ -1.18
VMA21-203ENST00000477649 BPTFQ12830 3046 aa7.66□□□□□ -1.18
VMA21-203ENST00000477649 SPTBN5Q9NRC6 3674 aaKnown RBP7.65□□□□□ -1.18
VMA21-203ENST00000477649 TRBV5-3A0A0A0MS03 114 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 DHRS12A0PJE2 317 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 PIPSLA2A3N6 862 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 EVPLLA8MZ36 301 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 C2CD4DB7Z1M9 353 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 MBTPS2O43462 519 aa7.65□□□□□ -1.18
VMA21-203ENST00000477649 LATO43561 262 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms