RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 TYMPP19971 482 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 MMP12P39900 470 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 OPRL1P41146 370 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 CETN2P41208 172 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 LEPRP48357 1165 aaKnown RBP2.9□□□□□ -1.95
TARDBP-208ENST00000477447 RGS7P49802 495 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 TRIM29Q14134 588 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 OPCMLQ14982 345 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 EXT1Q16394 746 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 RBBP7Q16576 425 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 FAM174BQ3ZCQ3 159 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 ZC2HC1BQ5TFG8 222 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 FAM91A1Q658Y4 838 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 NRARPQ7Z6K4 114 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 AMIGO1Q86WK6 493 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 LRTM2Q8N967 370 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 OR6S1Q8NH40 331 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 C9orf43Q8TAL5 461 aaPredicted RBP2.9□□□□□ -1.95
TARDBP-208ENST00000477447 GATAD1Q8WUU5 269 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 HEXDCQ8WVB3 486 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 METTL21AQ8WXB1 218 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 SEPT1Q8WYJ6 367 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 PIK3R3Q92569 461 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 WBP2Q969T9 261 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 ST6GALNAC6Q969X2 333 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 PGM2Q96G03 612 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 SPATA17Q96L03 361 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 KLHL5Q96PQ7 755 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 INTS14Q96SY0 518 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 NKX3-1Q99801 234 aaPredicted RBP2.9□□□□□ -1.95
TARDBP-208ENST00000477447 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.95
TARDBP-208ENST00000477447 SYT15Q9BQS2 421 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 NYXQ9GZU5 481 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 ZCCHC17Q9NP64 241 aaKnown RBP2.9□□□□□ -1.95
TARDBP-208ENST00000477447 BARHL2Q9NY43 387 aa2.9□□□□□ -1.95
TARDBP-208ENST00000477447 A0A087WUV0 522 aaPredicted RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 A0A087WV48 116 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 A0A1W2PR80 420 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 HTR3EA5X5Y0 456 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 C2CD4DB7Z1M9 353 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 F8VVB4 439 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 F8VWA3 439 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 TEX28O15482 410 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 ARHGEF9O43307 516 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 NXPH2O95156 264 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 PGLSO95336 258 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 DUS4LO95620 317 aaKnown RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 FAM58BPP0C7Q3 252 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 ZNF883P0CG24 379 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 RNF224P0DH78 156 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 IFNAR1P17181 557 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 RPL35AP18077 110 aaKnown RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 ADRA2CP18825 462 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SFTPDP35247 375 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 CLK1P49759 484 aaKnown RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 MFAP3P55082 362 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 IRX1P78414 480 aaPredicted RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 GUCY2DQ02846 1103 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 CACNG1Q06432 222 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 TMEM132DQ14C87 1099 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 HLA-BQ31612 363 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SPECC1Q5M775 1068 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SUSD4Q5VX71 490 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SHEQ5VZ18 495 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 BSPRYQ5W0U4 402 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 DCLRE1AQ6PJP8 1040 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 PET117Q6UWS5 81 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 LEKR1Q6ZMV7 388 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 ZNF497Q6ZNH5 498 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SLC24A5Q71RS6 500 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 PIGWQ7Z7B1 504 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 OR4C15Q8NGM1 316 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 MAPK15Q8TD08 544 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 ZNRF4Q8WWF5 429 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 RAD54LQ92698 747 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 P2RX5Q93086 422 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 EXOC4Q96A65 974 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 BTBD9Q96Q07 612 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 NDNQ99608 321 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 INPP5KQ9BT40 448 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SDCBP2Q9H190 292 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 RIMS4Q9H426 269 aaPredicted RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 ACTL8Q9H568 366 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 RNF121Q9H920 327 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 SPHK2Q9NRA0 654 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 PHPT1Q9NRX4 125 aaPredicted RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 PKD2L2Q9NZM6 624 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 EXOGQ9Y2C4 368 aaKnown RBP2.89□□□□□ -1.95
TARDBP-208ENST00000477447 IGSF1Q8N6C5 1336 aa2.89□□□□□ -1.95
TARDBP-208ENST00000477447 TRBV4-1A0A0J9YWV2 114 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 C15orf61A6NNL5 157 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 H0YAE9 185 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 PPIP5K2O43314 1243 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 ZNF500O60304 480 aaPredicted RBP2.88□□□□□ -1.95
TARDBP-208ENST00000477447 PRAF2O60831 178 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 ZFAND5O76080 213 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 VTNP04004 478 aa2.88□□□□□ -1.95
TARDBP-208ENST00000477447 RPN1P04843 607 aaKnown RBP2.88□□□□□ -1.95
TARDBP-208ENST00000477447 VIMP08670 466 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms