RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 AGPSO00116 658 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 CEACAM4O75871 244 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 SAT1P21673 171 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 CXCR2P25025 360 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 ITGA3P26006 1051 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 VARSP26640 1264 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 GCGRP47871 477 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 AVPR1BP47901 424 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 ETF1P62495 437 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 CAV1Q03135 178 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 AIMP2Q13155 320 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 NKG7Q16617 165 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 VWA5B1Q5TIE3 1220 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 FBXO42Q6P3S6 717 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 AGTRAPQ6RW13 159 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 STRA8Q7Z7C7 330 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 IGDCC3Q8IVU1 814 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 OR4N4Q8N0Y3 316 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 GALNT16Q8N428 558 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 FDCSPQ8NFU4 85 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 THAP11Q96EK4 314 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 ERP44Q9BS26 406 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 CRB3Q9BUF7 120 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 DRC3Q9H069 523 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 DPH5Q9H2P9 285 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 SOX17Q9H6I2 414 aaPredicted RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 SLAMF7Q9NQ25 335 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 C14orf105Q9NVL8 296 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 PDE10AQ9Y233 779 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 RUVBL1Q9Y265 456 aaKnown RBP13.16□□□□□ -0.3
TMCO1-205ENST00000476143 CCDC88CQ9P219 2028 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 ANKRD12Q6UB98 2062 aa13.16□□□□□ -0.3
TMCO1-205ENST00000476143 FAM95CA0A1B0GW59 222 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 E7ESA3 106 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 H7BY64 318 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 MAP2K7O14733 419 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 PCDH17O14917 1159 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 EIF3HO15372 352 aaKnown RBP eCLIP13.15□□□□□ -0.3
TMCO1-205ENST00000476143 FDXRP22570 491 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 GABRB3P28472 473 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 CDKN2DP55273 166 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 SKP1P63208 163 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 NAE1Q13564 534 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 MYBPC3Q14896 1274 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 TUBB8Q3ZCM7 444 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 ZNF425Q6IV72 752 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
TMCO1-205ENST00000476143 LCTLQ6UWM7 567 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 SYT10Q6XYQ8 523 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 FRA10AC1Q70Z53 315 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 PPP1R32Q7Z5V6 425 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 CAMKVQ8NCB2 501 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 MMABQ96EY8 250 aaPredicted RBP13.15□□□□□ -0.3
TMCO1-205ENST00000476143 PWWP2AQ96N64 755 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 PRAP1Q96NZ9 151 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 MKKSQ9NPJ1 570 aaPredicted RBP13.15□□□□□ -0.3
TMCO1-205ENST00000476143 TRPC4Q9UBN4 977 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 CTSFQ9UBX1 484 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 ADAMTS6Q9UKP5 1117 aa13.15□□□□□ -0.3
TMCO1-205ENST00000476143 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 MDC1Q14676 2089 aaKnown RBP13.14□□□□□ -0.31
TMCO1-205ENST00000476143 VPS4BO75351 444 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 UMODP07911 640 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 UQCRHP07919 91 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 SLC35G6P0C7Q6 338 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 C2orf54Q08AI8 447 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 RAPSNQ13702 412 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 DSG2Q14126 1118 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 FAM53BQ14153 422 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 PRTGQ2VWP7 1150 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 DUPD1Q68J44 220 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 CAPN12Q6ZSI9 719 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 LRRC56Q8IYG6 542 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-205ENST00000476143 STT3BQ8TCJ2 826 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-205ENST00000476143 TSPAN17Q96FV3 270 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 OR2A5Q96R48 311 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 SPSB2Q99619 263 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 SMAD5Q99717 465 aaKnown RBP13.14□□□□□ -0.31
TMCO1-205ENST00000476143 NUDT9Q9BW91 350 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 ATG10Q9H0Y0 220 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 SAYSD1Q9NPB0 183 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 SLC22A11Q9NSA0 550 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 CUEDC1Q9NWM3 386 aaPredicted RBP13.14□□□□□ -0.31
TMCO1-205ENST00000476143 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 SLC17A6Q9P2U8 582 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 VPS4AQ9UN37 437 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
TMCO1-205ENST00000476143 TNRC6AQ8NDV7 1962 aaKnown RBP13.14□□□□□ -0.31
TMCO1-205ENST00000476143 MED13Q9UHV7 2174 aa13.13□□□□□ -0.31
TMCO1-205ENST00000476143 IGKV1-8A0A0C4DH67 115 aa13.13□□□□□ -0.31
TMCO1-205ENST00000476143 K7EM74 188 aa13.13□□□□□ -0.31
TMCO1-205ENST00000476143 HAT1O14929 419 aa13.13□□□□□ -0.31
TMCO1-205ENST00000476143 RAD51CO43502 376 aa13.13□□□□□ -0.31
TMCO1-205ENST00000476143 NRP2O60462 931 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms