RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ZZZ3Q8IYH5 903 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR156Q8NFN8 814 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 KBTBD8Q8NFY9 601 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 OR1M1Q8NGA1 313 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 CANT1Q8WVQ1 401 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF566Q969W8 418 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 TEPSINQ96N21 525 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ZDHHC5Q9C0B5 715 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 POLR1EQ9GZS1 481 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 KCNH6Q9H252 994 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 OSGEPL1Q9H4B0 414 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ZBTB26Q9HCK0 441 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ACSS2Q9NR19 701 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 TBC1D22BQ9NU19 505 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 TRMT13Q9NUP7 481 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 LYARQ9NX58 379 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 RDH8Q9NYR8 311 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 HECAQ9UBI9 543 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 AFG3L2Q9Y4W6 797 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ATP23Q9Y6H3 246 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 PIAS3Q9Y6X2 628 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SYNJ2BP-COX16A0A087WUM0 186 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 EFCAB9A8MZ26 197 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 GLRA3O75311 464 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 H2AFYO75367 372 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SOAT2O75908 522 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 IGHV2-70P01814 119 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 FBP1P09467 338 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 LTA4HP09960 611 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 GLI4P10075 376 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ADRA1BP35368 520 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ATP5OP48047 213 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC6A11P48066 632 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 RGS19P49795 217 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 TKTL1P51854 596 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 LIMK1P53667 647 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 FGL1Q08830 312 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ASAH1Q13510 395 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 CAPRIN1Q14444 709 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SLC14A2Q15849 920 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 AP5B1Q2VPB7 878 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 FAM182AQ5T1J6 154 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 RAP1GAP2Q684P5 730 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 KDM4DQ6B0I6 523 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ESRP1Q6NXG1 681 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF530Q6P9A1 599 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 INTS5Q6P9B9 1019 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 HACD2Q6Y1H2 254 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF574Q6ZN55 896 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 KCTD1Q719H9 257 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ENOSF1Q7L5Y1 443 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SYVN1Q86TM6 617 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 CCDC190Q86UF4 302 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SPPL2CQ8IUH8 684 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 KRT78Q8N1N4 520 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 STX19Q8N4C7 294 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ZNF557Q8N988 423 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 IL17RCQ8NAC3 791 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 NUP43Q8NFH3 380 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ELP4Q96EB1 424 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 AURKBQ96GD4 344 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 ACO2Q99798 780 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 PCDHAC1Q9H158 963 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 TTYH1Q9H313 450 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 MS4A5Q9H3V2 200 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 SMOC1Q9H4F8 434 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 RNF121Q9H920 327 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 AP1M2Q9Y6Q5 423 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 U3KQV3 271 aa4.99□□□□□ -1.61
TMEM39A-206ENST00000473684 A0A0G2JPF8 293 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 CCDC78A2IDD5 438 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TCAF2A6NFQ2 919 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 HNRNPCL3B7ZW38 293 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RPS6KA4O75676 772 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RBBP9O75884 186 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TMEM63AO94886 807 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SOX30O94993 753 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ARIH2O95376 493 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 GSRP00390 522 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 HPRP00739 348 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 HNRNPCL4P0DMR1 293 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PRG2P13727 222 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TNNI1P19237 187 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PTAFRP25105 342 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ALDH4A1P30038 563 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 MAPK4P31152 587 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SHMT2P34897 504 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RORAP35398 523 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 TECP42680 631 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 BRCC3P46736 316 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 CLCNKAP51800 687 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ALCAMQ13740 583 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 ETFDHQ16134 617 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 EPC2Q52LR7 807 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 FNBP1LQ5T0N5 605 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 SLFN12LQ6IEE8 588 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RAB11FIP2Q7L804 512 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 GPR155Q7Z3F1 870 aa4.98□□□□□ -1.61
TMEM39A-206ENST00000473684 RHOT1Q8IXI2 618 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms