RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ZNF367Q7RTV3 350 aa2.53□□□□□ -2
XRN1-210ENST00000472697 ZNF551Q7Z340 670 aaPredicted RBP2.53□□□□□ -2
XRN1-210ENST00000472697 TMEM126BQ8IUX1 230 aa2.53□□□□□ -2
XRN1-210ENST00000472697 TMEM139Q8IV31 216 aa2.53□□□□□ -2
XRN1-210ENST00000472697 WDR49Q8IV35 697 aa2.53□□□□□ -2
XRN1-210ENST00000472697 TIGD4Q8IY51 512 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SLC25A41Q8N5S1 370 aa2.53□□□□□ -2
XRN1-210ENST00000472697 RASGEF1AQ8N9B8 481 aa2.53□□□□□ -2
XRN1-210ENST00000472697 ENGASEQ8NFI3 743 aa2.53□□□□□ -2
XRN1-210ENST00000472697 ACTRT2Q8TDY3 377 aa2.53□□□□□ -2
XRN1-210ENST00000472697 RPL3LQ92901 407 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 TMEM186Q96B77 213 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SNRNP40Q96DI7 357 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 OXNAD1Q96HP4 312 aaPredicted RBP2.53□□□□□ -2
XRN1-210ENST00000472697 AGAP3Q96P47 875 aa2.53□□□□□ -2
XRN1-210ENST00000472697 BBC3Q96PG8 261 aaPredicted RBP2.53□□□□□ -2
XRN1-210ENST00000472697 NYXQ9GZU5 481 aa2.53□□□□□ -2
XRN1-210ENST00000472697 TMEM245Q9H330 911 aa2.53□□□□□ -2
XRN1-210ENST00000472697 TOR3AQ9H497 397 aa2.53□□□□□ -2
XRN1-210ENST00000472697 GPN1Q9HCN4 374 aaPredicted RBP2.53□□□□□ -2
XRN1-210ENST00000472697 PNRC2Q9NPJ4 139 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 TMEM51Q9NW97 253 aa2.53□□□□□ -2
XRN1-210ENST00000472697 MSRB1Q9NZV6 116 aa2.53□□□□□ -2
XRN1-210ENST00000472697 COPS7AQ9UBW8 275 aa2.53□□□□□ -2
XRN1-210ENST00000472697 UBQLN2Q9UHD9 624 aa2.53□□□□□ -2
XRN1-210ENST00000472697 IPO11Q9UI26 975 aaKnown RBP2.53□□□□□ -2
XRN1-210ENST00000472697 NSG2Q9Y328 171 aa2.53□□□□□ -2
XRN1-210ENST00000472697 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.53□□□□□ -2
XRN1-210ENST00000472697 NAIPQ13075 1403 aa2.53□□□□□ -2
XRN1-210ENST00000472697 NPC1L1Q9UHC9 1359 aa2.53□□□□□ -2
XRN1-210ENST00000472697 SPATA31A1Q5TZJ5 1347 aa2.53□□□□□ -2
XRN1-210ENST00000472697 LINC00854A0A1B0GVQ3 168 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 FAM90A26D6RGX4 464 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 MPPED1O15442 326 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 MAGEB2O15479 319 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 NDUFS4O43181 175 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 CYTIPO60759 359 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 NOL3O60936 208 aaKnown RBP2.53□□□□□ -2.01
XRN1-210ENST00000472697 ZNF623O75123 536 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 SPAG6O75602 509 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 NEBLO76041 1014 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 CCDC192P0DO97 292 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 HAPLN1P10915 354 aaPredicted RBP2.53□□□□□ -2.01
XRN1-210ENST00000472697 NR1D1P20393 614 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 DNAJB1P25685 340 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 PSMA5P28066 241 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 PTGER4P35408 488 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 GRIA3P42263 894 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 B3GALT5-AS1P59052 145 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 NUCB2P80303 420 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 SP3Q02447 781 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 CTTNQ14247 550 aaKnown RBP2.53□□□□□ -2.01
XRN1-210ENST00000472697 GAMTQ14353 236 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 SHBQ15464 509 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 SPDYCQ5MJ68 293 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 GRTP1Q5TC63 336 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 LRIG3Q6UXM1 1119 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 Q6ZSV7 163 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 ZDHHC21Q8IVQ6 265 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 LGI4Q8N135 537 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 GBGT1Q8N5D6 347 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 LRTM2Q8N967 370 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 GPRC5AQ8NFJ5 357 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 AKR7LQ8NHP1 331 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 FUBP1Q96AE4 644 aaKnown RBP2.53□□□□□ -2.01
XRN1-210ENST00000472697 TUBGCP3Q96CW5 907 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 ZNF570Q96NI8 536 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 LRRC3BQ96PB8 259 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 PLEKHG4BQ96PX9 1271 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 ATG101Q9BSB4 218 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 GPR61Q9BZJ8 451 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 MAGT1Q9H0U3 335 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 METTL7AQ9H8H3 244 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 LRRC4Q9HBW1 653 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 A4GALTQ9NPC4 353 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 NMRK1Q9NWW6 199 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 USP54Q70EL1 1684 aa2.53□□□□□ -2.01
XRN1-210ENST00000472697 FER1L5A0AVI2 2057 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ABCC4O15439 1325 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 TAF1P21675 1872 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 BRCA1P38398 1863 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 A0A1W2PP11 408 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 hDV102S1A0JD36 115 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SH3PXD2BA1X283 911 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 MAGEB16A2A368 324 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 HYKKA2RU49 373 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 BECN2A8MW95 431 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 DIRC3C9JPN6 131 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SLC16A5O15375 505 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 RNMTO43148 476 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 NUAK1O60285 661 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 CA3P07451 260 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 SPP1P10451 314 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ATP6V1C1P21283 382 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 ARSEP51690 589 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 TFAP4Q01664 338 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 GABPB1Q06547 395 aaPredicted RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 KIF5AQ12840 1032 aa2.52□□□□□ -2.01
XRN1-210ENST00000472697 MVPQ14764 893 aaKnown RBP2.52□□□□□ -2.01
XRN1-210ENST00000472697 PRKD1Q15139 912 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms