RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 FCRLBQ6BAA4 426 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 H3F3CQ6NXT2 135 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 ACAD11Q709F0 780 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 CD163Q86VB7 1156 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 CDKL3Q8IVW4 592 aaPredicted RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 LGI4Q8N135 537 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 MCOLN3Q8TDD5 553 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 SKA2Q8WVK7 121 aaPredicted RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 NRGNQ92686 78 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 TMEM125Q96AQ2 219 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 FOPNLQ96NB1 174 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 NAP1L5Q96NT1 182 aaPredicted RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 PACSIN1Q9BY11 444 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 POLDIP3Q9BY77 421 aaKnown RBP13.18□□□□□ -0.3
SMURF1-203ENST00000472627 HES7Q9BYE0 225 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 LRFN1Q9P244 771 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 CIDEBQ9UHD4 219 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 NENFQ9UMX5 172 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 RNF6Q9Y252 685 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 ASB1Q9Y576 335 aa13.18□□□□□ -0.3
SMURF1-203ENST00000472627 H0YGG7 62 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 PRMT3O60678 531 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 SLC25A12O75746 678 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 TOXO94900 526 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 CCNFP41002 786 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ARF3P61204 181 aaPredicted RBP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 TPM4P67936 248 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 TFF3Q07654 80 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 MSLNQ13421 630 aaPredicted RBP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 CAMKMTQ7Z624 323 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ZC3H7AQ8IWR0 971 aaKnown RBP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 AMER3Q8N944 861 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 HMGCLL1Q8TB92 370 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 M1APQ8TC57 530 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 GORASP1Q9BQQ3 440 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 MMP25Q9NPA2 562 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 DLL4Q9NR61 685 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 RUVBL1Q9Y265 456 aaKnown RBP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ALG6Q9Y672 507 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 PRRC2AP48634 2157 aaKnown RBP13.17□□□□□ -0.3
SMURF1-203ENST00000472627 ACANP16112 2415 aa13.17□□□□□ -0.3
SMURF1-203ENST00000472627 A0A0A6YYC8 382 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-203ENST00000472627 MACROD2A1Z1Q3 448 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 OR2A25A4D2G3 310 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 FAM171A2A8MVW0 826 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 I3L1I5 382 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-203ENST00000472627 APOC4-APOC2K7ER74 178 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 AKR1B10O60218 316 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 CCNDBP1O95273 360 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 GAS8O95995 478 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 APOC2P02655 101 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 ADSLP30566 484 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-203ENST00000472627 PEX19P40855 299 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 MEOX1P50221 254 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 TYRO3Q06418 890 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 PTK6Q13882 451 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 FAM53BQ14153 422 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 GRB7Q14451 532 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 POU6F1Q14863 301 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 LRRC8BQ6P9F7 803 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 RCOR2Q8IZ40 523 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 GOT1L1Q8NHS2 421 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-203ENST00000472627 HDAC10Q969S8 669 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 CYTH2Q99418 400 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 UCK2Q9BZX2 261 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 CLEC4MQ9H2X3 399 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-203ENST00000472627 SPATA7Q9P0W8 599 aa13.16□□□□□ -0.3
SMURF1-203ENST00000472627 RPH3AQ9Y2J0 694 aaPredicted RBP13.16□□□□□ -0.3
SMURF1-203ENST00000472627 hCG_1818297A0A087WSY0 165 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 SOWAHDA6NJG2 315 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 H0YIG0 161 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 KPNA5O15131 536 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 NME2P1O60361 137 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 GPC4O75487 556 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 NEURL1O76050 574 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 COMTP21964 271 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 NME2P22392 152 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 PSMB5P28074 263 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 CCR7P32248 378 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 CYB561P49447 251 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 ACTN3Q08043 901 aaPredicted RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 AARS2Q5JTZ9 985 aaKnown RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 DENND5AQ6IQ26 1287 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 ARHGAP11AQ6P4F7 1023 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 AFTPHQ6ULP2 937 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 PAQR7Q86WK9 346 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 CPSF7Q8N684 471 aaKnown RBP13.15□□□□□ -0.3
SMURF1-203ENST00000472627 OR2A1Q8NGT9 310 aa13.15□□□□□ -0.3
SMURF1-203ENST00000472627 SPATA13Q96N96 652 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms