RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 GUF1Q8N442 669 aaKnown RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 TTC30BQ8N4P2 665 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 CD177Q8N6Q3 437 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 C4orf32Q8N8J7 132 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 KLHL30-AS1Q8NEE0 82 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 PIGBQ92521 554 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 LPGAT1Q92604 370 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 SPACA9Q96E40 222 aaPredicted RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 C2orf48Q96LS8 159 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 PAFAH2Q99487 392 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 TEX12Q9BXU0 123 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 TMX4Q9H1E5 349 aaPredicted RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 ASB8Q9H765 288 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 ABT1Q9ULW3 272 aaKnown RBP1.51□□□□□ -2.17
COMMD3-209ENST00000471350 AUP1Q9Y679 476 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 KIF25-AS1Q9Y6Z4 181 aa1.51□□□□□ -2.17
COMMD3-209ENST00000471350 ZNF646O15015 1829 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 FAM205AQ6ZU69 1335 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 GPR75-ASB3A0A0A6YYF3 556 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 TRBV4-1A0A0J9YWV2 114 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 OR2A25A4D2G3 310 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 TMEM221A6NGB7 291 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 SHISA7A6NL88 538 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 E9PAM4 449 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 NPIPB9F8W1W9 429 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 EPB41L2O43491 1005 aaKnown RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ZNF354AO60765 605 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 TSPAN9O75954 239 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 BCL10O95999 233 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 THY1P04216 161 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ATP1B1P05026 303 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 DANCRP0C864 163 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ADORA3P0DMS8 318 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 MYOGP15173 224 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 PFKFB1P16118 471 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 MGMTP16455 207 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 GARSP41250 739 aaKnown RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 VAMP7P51809 220 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 STAT2P52630 851 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 RIDAP52758 137 aaKnown RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 NDST2P52849 883 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 SRPXP78539 464 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 IRF3Q14653 427 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 OPCMLQ14982 345 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ATAD3CQ5T2N8 411 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 TMEM211Q6ICI0 200 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 CCDC70Q6NSX1 233 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 TEX38Q6PEX7 206 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 SLC24A5Q71RS6 500 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 NUP54Q7Z3B4 507 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 SMC5Q8IY18 1101 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 GPC2Q8N158 579 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 CSNK1G2-AS1Q8NCQ2 148 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 APPL2Q8NEU8 664 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 TSPAN14Q8NG11 270 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 SPPL2AQ8TCT8 520 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 PTPMT1Q8WUK0 201 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 CDCA3Q99618 268 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 HNRNPABQ99729 332 aaKnown RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 OLFM1Q99784 485 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 LRRCC1Q9C099 1032 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 SLITRK2Q9H156 845 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 Q9N2K0 584 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ADAM22Q9P0K1 906 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ZNF581Q9P0T4 197 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 CPSF3Q9UKF6 684 aaKnown RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 ZNF215Q9UL58 517 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 PLCL2Q9UPR0 1127 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 NTNG1Q9Y2I2 539 aa1.5□□□□□ -2.17
COMMD3-209ENST00000471350 WBP11Q9Y2W2 641 aaKnown RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 COL4A4P53420 1690 aaPredicted RBP1.5□□□□□ -2.17
COMMD3-209ENST00000471350 RNF123Q5XPI4 1314 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 NPHP3Q7Z494 1330 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 TRBV5-5A0A0J9YX44 114 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 FAM220BPB1ANY3 271 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 TPD52L2O43399 206 aaKnown RBP1.49□□□□□ -2.17
COMMD3-209ENST00000471350 SNX3O60493 162 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 USO1O60763 962 aaKnown RBP1.49□□□□□ -2.17
COMMD3-209ENST00000471350 ZBED4O75132 1171 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 RPS6KA5O75582 802 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 NXPH4O95158 308 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 ACSL3O95573 720 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 C9P02748 559 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 LMO2P25791 158 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 GCH1P30793 250 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 HADHAP40939 763 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 NRIP1P48552 1158 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 KHKP50053 298 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 ATP4BP51164 291 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 MAPK12P53778 367 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 NAP1L1P55209 391 aaKnown RBP1.49□□□□□ -2.17
COMMD3-209ENST00000471350 UBXN2AP68543 259 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 CUL3Q13618 768 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 ITGA7Q13683 1181 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 VEZF1Q14119 521 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 SNAPC1Q16533 368 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 CBWD6Q4V339 395 aa1.49□□□□□ -2.17
COMMD3-209ENST00000471350 CBWD3Q5JTY5 395 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms