RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TAC3Q9UHF0 121 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 ANGPTL3Q9Y5C1 460 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 PCDHGB2Q9Y5G2 931 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 SPTBP11277 2137 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 KLF11O14901 512 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 FLRT2O43155 660 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 H2AFYO75367 372 aaKnown RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 UBXN7O94888 489 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 CHRM5P08912 532 aaPredicted RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 NPPBP16860 134 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 EPORP19235 508 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 POLR2CP19387 275 aaPredicted RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 CCND1P24385 295 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 GRK2P25098 689 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 PRDX3P30048 256 aaKnown RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 SLC1A6P48664 564 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 GNGT1P63211 74 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 NHLH1Q02575 133 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 CDC16Q13042 620 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 STX3Q13277 289 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 SLC14A1Q13336 389 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 RIPK1Q13546 671 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 RCN2Q14257 317 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 NR0B2Q15466 257 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 ARL13AQ5H913 290 aaPredicted RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 PRAMEF13Q5VWM6 474 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF438Q7Z4V0 828 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 SAMD14Q8IZD0 417 aaPredicted RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 LSMEM2Q8N112 164 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 NEIL2Q969S2 332 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 CNDP1Q96KN2 507 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 TRAPPC9Q96Q05 1148 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 CDK15Q96Q40 435 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 CGREF1Q99674 301 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 DRC3Q9H069 523 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 OCEL1Q9H607 264 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 NOL11Q9H8H0 719 aaKnown RBP6.62□□□□□ -1.35
SCAF4-204ENST00000467731 IPPKQ9H8X2 491 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 DNAJC11Q9NVH1 559 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 HRASLS2Q9NWW9 162 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 SH2B3Q9UQQ2 575 aa6.62□□□□□ -1.35
SCAF4-204ENST00000467731 PIPSLA2A3N6 862 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CPED1A4D0V7 1026 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 GSAPA4D1B5 854 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 FAM221BA6H8Z2 402 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 C4orf47A7E2U8 309 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 TCP11X1B4DZS4 312 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 UBFD1O14562 309 aaKnown RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OR7A17O14581 309 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CASC3O15234 703 aaKnown RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 NPHS1O60500 1241 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 SNNO75324 88 aaPredicted RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 KATNA1O75449 491 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 DNAJC8O75937 253 aaPredicted RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 HNRNPCP07910 306 aaKnown RBP eCLIP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CD59P13987 128 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ARL1P40616 181 aaPredicted RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CD97P48960 835 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PPM1FP49593 454 aaPredicted RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CCNG1P51959 295 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OR1D5P58170 312 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ABCE1P61221 599 aaKnown RBP6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PPP1CAP62136 330 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 LCP2Q13094 533 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 RBBP7Q16576 425 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 PROX2Q3B8N5 592 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 FAM219BQ5XKK7 198 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 LCTLQ6UWM7 567 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 FAM47EQ6ZV65 393 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ASCL5Q7RTU5 278 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF554Q86TJ5 538 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OOSP2Q86WS3 158 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 KLHDC8AQ8IYD2 350 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 SNX31Q8N9S9 440 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OR2A1Q8NGT9 310 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 RHBDD1Q8TEB9 315 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ATP6V1E2Q96A05 226 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CCDC74AQ96AQ1 378 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 SORT1Q99523 831 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 MIPEPQ99797 713 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CCDC134Q9H6E4 229 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 THAP1Q9NVV9 213 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 KCNK4Q9NYG8 393 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 RAPGEFL1Q9UHV5 662 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ZNF225Q9UK10 706 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 KCNE2Q9Y6J6 123 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 LINC00854A0A1B0GVQ3 168 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 OR5K3A6NET4 321 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 ISM1B1AKI9 464 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 TMEM114B3SHH9 223 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 E7EQ34 232 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 HSPA4LO95757 839 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CKMT1AP12532 417 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 AMD1P17707 334 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 GNAZP19086 355 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 SERPINB5P36952 375 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 GPR3P46089 330 aa6.61□□□□□ -1.35
SCAF4-204ENST00000467731 CAPZBP47756 277 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms