RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	KLHL14	Q9P2G3	628 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	KLHL3	Q9UH77	587 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	PTBP2	Q9UKA9	531 aa	Known RBP	11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	PILRA	Q9UKJ1	303 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	RAP2C	Q9Y3L5	183 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	PCDHGA4	Q9Y5G9	962 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	HEBP2	Q9Y5Z4	205 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	PCM1	Q15154	2024 aa		11.65	□□□□□ -0.54
CTNS-205	ENST00000467663	FASN	P49327	2511 aa	Known RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	ZNF839	A8K0R7	811 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	UBXN8	O00124	270 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	CAPN5	O15484	640 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	RAD1	O60671	282 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	HSPA4L	O95757	839 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	ITGB2	P05107	769 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	RPS17	P08708	135 aa	Known RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	ACADL	P28330	430 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	NDUFS1	P28331	727 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	GMPR	P36959	345 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PFKFB4	Q16877	469 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	FRMD7	Q6ZUT3	714 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PRSS42	Q7Z5A4	293 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PIGW	Q7Z7B1	504 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	RAB42	Q8N4Z0	105 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	ZSCAN1	Q8NBB4	408 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	ZFPM2	Q8WW38	1151 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	JPH3	Q8WXH2	748 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	KLHL6	Q8WZ60	621 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	RSC1A1	Q92681	617 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	RAD51AP1	Q96B01	352 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	FBXL8	Q96CD0	374 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PHF21B	Q96EK2	531 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	TGM7	Q96PF1	710 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	CTRC	Q99895	268 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	OR52A5	Q9H2C5	316 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	ZNF768	Q9H5H4	540 aa	Known RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	APMAP	Q9HDC9	416 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	FGFR1OP2	Q9NVK5	253 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	SEMA5B	Q9P283	1151 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	VTI1B	Q9UEU0	232 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PSMD13	Q9UNM6	376 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	PDE10A	Q9Y233	779 aa		11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	SMG1	Q96Q15	3661 aa	Known RBP	11.64	□□□□□ -0.55
CTNS-205	ENST00000467663	SDK2	Q58EX2	2172 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	POLR1C	O15160	346 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	SNX3	O60493	162 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	KATNA1	O75449	491 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	SUPT7L	O94864	414 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	SLC35G4	P0C7Q5	338 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	MTHFD1	P11586	935 aa	Known RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	CCND1	P24385	295 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	PBLD	P30039	288 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	CDC16	Q13042	620 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	LY6D	Q14210	128 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	ARHGAP19	Q14CB8	494 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	LINC00303	Q3SY05	128 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	LRRC70	Q7Z2Q7	622 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	DCUN1D3	Q8IWE4	304 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	KLHDC8A	Q8IYD2	350 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	TBC1D21	Q8IYX1	336 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	CACNA2D3	Q8IZS8	1091 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	IL22RA1	Q8N6P7	574 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	CCNYL1	Q8N7R7	359 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	ZNF473	Q8WTR7	871 aa	Known RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	RHBDF1	Q96CC6	855 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	MED8	Q96G25	268 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	ZDHHC12	Q96GR4	267 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	TMEM237	Q96Q45	408 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	INSM2	Q96T92	566 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	CCT7	Q99832	543 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	EGFL8	Q99944	293 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	RAB11FIP5	Q9BXF6	653 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	UNK	Q9C0B0	810 aa	Known RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	SEMA4C	Q9C0C4	833 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	MVB12B	Q9H7P6	319 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	MRGBP	Q9NV56	204 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	ARL15	Q9NXU5	204 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	POLG2	Q9UHN1	485 aa		11.63	□□□□□ -0.55
CTNS-205	ENST00000467663	KIF1C	O43896	1103 aa	Known RBP	11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	STK16	O75716	305 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	STK17B	O94768	372 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	C1orf105	O95561	183 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	DLGAP3	O95886	979 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	FGF4	P08620	206 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	LIF	P15018	202 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	RPL14	P50914	215 aa	Known RBP	11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	PKNOX1	P55347	436 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	CLC	Q05315	142 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	LCP2	Q13094	533 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	MAP7	Q14244	749 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	IL11RA	Q14626	422 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	UNC50	Q53HI1	259 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	ARL13A	Q5H913	290 aa	Predicted RBP	11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	CACHD1	Q5VU97	1274 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	KLHL35	Q6PF15	583 aa		11.62	□□□□□ -0.55
CTNS-205	ENST00000467663	ZCCHC23	Q6ZST2	131 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms