RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MAATS1Q7Z4T9 603 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 GPD1LQ8N335 351 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 POC5Q8NA72 575 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 TDRD5Q8NAT2 981 aaKnown RBP2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 KLHL30-AS1Q8NEE0 82 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 OR10G7Q8NGN6 311 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 SSC4DQ8WTU2 575 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 HDAC2Q92769 488 aaKnown RBP2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 SKA1Q96BD8 255 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CALML4Q96GE6 196 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 CCDC28BQ9BUN5 200 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM49AQ9H0Q0 323 aaPredicted RBP2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 ADNPQ9H2P0 1102 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 PRMT7Q9NVM4 692 aaPredicted RBP2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 GTSE1Q9NYZ3 720 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 LNPEPQ9UIQ6 1025 aa2.2□□□□□ -2.06
GTF3C3-209ENST00000466862 PTGESO14684 152 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 EPB41L2O43491 1005 aaKnown RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 DOK2O60496 412 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 SLCO2B1O94956 709 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 RAB40ALP0C0E4 278 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 CASP2P42575 452 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 DDX10Q13206 875 aaKnown RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 PTPN14Q15678 1187 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 C15orf59Q2T9L4 293 aaPredicted RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 DMKNQ6E0U4 476 aaPredicted RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 FAAH2Q6GMR7 532 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM198BQ6UWH4 519 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 C1orf122Q6ZSJ8 110 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 SLC34A3Q8N130 599 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM89BQ8N5H3 189 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 MINDY1Q8N5J2 469 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 RTL3Q8N8U3 475 aaKnown RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 C1orf131Q8NDD1 294 aaKnown RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 OR7A2PQ8NGA2 310 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 OR4K1Q8NGD4 311 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 PIK3R3Q92569 461 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 SPACA9Q96E40 222 aaPredicted RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 FAM71F1Q96KD3 344 aaPredicted RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 SFXN2Q96NB2 322 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 CHCHD5Q9BSY4 110 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 MAK16Q9BXY0 300 aaKnown RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 DNAI2Q9GZS0 605 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 SYNCQ9H7C4 482 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 GPN1Q9HCN4 374 aaPredicted RBP2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 NYAP2Q9P242 653 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 PRO0461Q9UI25 63 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 ATRXP46100 2492 aa2.19□□□□□ -2.06
GTF3C3-209ENST00000466862 LOC100509620A0A075B734 347 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 TRBV4-1A0A0J9YWV2 114 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 MTMR11A4FU01 709 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 CASTOR2A6NHX0 329 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 SRRM4A7MD48 611 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 AP3D1O14617 1153 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 SURF4O15260 269 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 ENTPD3O75355 529 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 KRT6AP02538 564 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 KRT6BP04259 564 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 HSP90AA1P07900 732 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 KRT6CP48668 564 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 KHKP50053 298 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 ATP4BP51164 291 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 OR1D5P58170 312 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 ZNF146Q15072 292 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 HYIQ5T013 277 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 OR4A47Q6IF82 309 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 MFSD12Q6NUT3 480 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 FCRLAQ7L513 359 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 ADCK1Q86TW2 530 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 LGI2Q8N0V4 545 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 C11orf42Q8N5U0 333 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 C11orf52Q96A22 123 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 THOC1Q96FV9 657 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 CNOT6LQ96LI5 555 aaKnown RBP2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 PSMB7Q99436 277 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 CHCHD6Q9BRQ6 235 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 PI4K2AQ9BTU6 479 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 ZMYND12Q9H0C1 365 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 B4GALT7Q9UBV7 327 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 POMT2Q9UKY4 750 aa2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 COL4A4P53420 1690 aaPredicted RBP2.18□□□□□ -2.06
GTF3C3-209ENST00000466862 TRAFD1O14545 582 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 PRB2P02812 416 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 LDHCP07864 332 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 IRF2P14316 349 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 ELAVL4P26378 380 aaKnown RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 RXRGP48443 463 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 DCDC1P59894 354 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 NDPQ00604 133 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 FKBP3Q00688 224 aaKnown RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 TRAP1Q12931 704 aaKnown RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 BAATQ14032 418 aaPredicted RBP2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 NPTX1Q15818 432 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 MCMDC2Q4G0Z9 681 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 CBWD6Q4V339 395 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 IGSF11Q5DX21 431 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 CBWD3Q5JTY5 395 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 REG3GQ6UW15 175 aa2.17□□□□□ -2.06
GTF3C3-209ENST00000466862 CFAP61Q8NHU2 1237 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms