RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 RNF169Q8NCN4 708 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF397Q8NF99 534 aaPredicted RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 OR5M1Q8NGP8 315 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 OR13C3Q8NGS6 347 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 OR6Y1Q8NGX8 325 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 POMGNT1Q8WZA1 660 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 HOXB13Q92826 284 aaPredicted RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 FUBP1Q96AE4 644 aaKnown RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 DGAT2Q96PD7 388 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 VPS35Q96QK1 796 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 CCNL2Q96S94 520 aaPredicted RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 PSD2Q9BQI7 771 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 MRI1Q9BV20 369 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 SLC25A23Q9BV35 468 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 YIPF3Q9GZM5 350 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 FBXO44Q9H4M3 255 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 CHODLQ9H9P2 273 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 MMP25Q9NPA2 562 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 DIABLOQ9NR28 239 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 PANK4Q9NVE7 773 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 ARL8BQ9NVJ2 186 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 LPAR3Q9UBY5 353 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF70Q9UC06 446 aaPredicted RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 SERGEFQ9UGK8 458 aa5.52□□□□□ -1.53
LRCH3-212ENST00000466845 APOBEC3BQ9UH17 382 aaKnown RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 TRMT6Q9UJA5 497 aaKnown RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 FAF1Q9UNN5 650 aaPredicted RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 PTRH2Q9Y3E5 179 aaKnown RBP5.52□□□□□ -1.53
LRCH3-212ENST00000466845 RGPD1P0DJD0 1748 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SPATA31A5Q5VU36 1347 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SPATA31A7Q8IWB4 1347 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 THSD7AQ9UPZ6 1657 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 EFCAB10A6NFE3 127 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 OR2AG2A6NM03 316 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 OR52A4PA6NMU1 304 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 NR5A2O00482 541 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CES2O00748 559 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 BET1O15155 118 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF185O15231 689 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SEPT4O43236 478 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 COCHO43405 550 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 KCNQ3O43525 872 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 DHFRP00374 187 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CALCAP01258 141 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 GNAI2P04899 355 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 STSP08842 583 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 UBTFL1P0CB47 393 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SRCP12931 536 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ICAM2P13598 275 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 F3P13726 295 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ERCC2P18074 760 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 NCF2P19878 526 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ITGAXP20702 1163 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 GABRB3P28472 473 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 OTX2P32243 289 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 MC5RP33032 325 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SLC1A1P43005 524 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CDC34P49427 236 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 LIG4P49917 911 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CHN2P52757 468 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CDH4P55283 916 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 PEX3P56589 373 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 LRRC63Q05C16 580 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 PRKAA1Q13131 559 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 DMP1Q13316 513 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 PPIGQ13427 754 aaKnown RBP eCLIP5.51□□□□□ -1.531e-9■□□□□ 10.8
LRCH3-212ENST00000466845 OLIG2Q13516 323 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF273Q14593 569 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 C3orf36Q3SXR2 165 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 C3orf38Q5JPI3 329 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 BRMS1LQ5PSV4 323 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 METTL21CQ5VZV1 264 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CST9LP1Q5W188 147 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 RAET1GQ6H3X3 334 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CDC73Q6P1J9 531 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 C3orf33Q6P1S2 294 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 FBXO46Q6PJ61 603 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 VITQ6UXI7 678 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CLEC9AQ6UXN8 241 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 C4orf22Q6V702 233 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 KIAA0408Q6ZU52 694 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ERICH1Q86X53 443 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ZFAND4Q86XD8 727 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CNGA4Q8IV77 575 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 DHX40Q8IX18 779 aaKnown RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 FBXL16Q8N461 479 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 FSTL5Q8N475 847 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SH2D3CQ8N5H7 860 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 PI4KAP1Q8N8J0 262 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 L3MBTL4Q8NA19 623 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 MLKLQ8NB16 471 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 PSD4Q8NDX1 1056 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 DBF4BQ8NFT6 615 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 NLGN4YQ8NFZ3 816 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 OR52N1Q8NH53 320 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SLC35B2Q8TB61 432 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF473Q8WTR7 871 aaKnown RBP5.51□□□□□ -1.53
LRCH3-212ENST00000466845 SNX19Q92543 992 aa5.51□□□□□ -1.53
LRCH3-212ENST00000466845 CD101Q93033 1021 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms