RNA–Protein interactions for RNA: ENST00000466359.1

NFX1-205, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-205	ENST00000466359	TMEM79	Q9BSE2	394 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	DPH7	Q9BTV6	452 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	ATG10	Q9H0Y0	220 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	PCMTD2	Q9NV79	361 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	TMEM9	Q9P0T7	183 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	XPR1	Q9UBH6	696 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	EMCN	Q9ULC0	261 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	SLC22A14	Q9Y267	594 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	LOXL2	Q9Y4K0	774 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	TMEM184B	Q9Y519	407 aa	Predicted RBP	5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	SLC22A7	Q9Y694	548 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	ACACB	O00763	2458 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	PLXNB3	Q9ULL4	1909 aa		5.68	□□□□□ -1.5
NFX1-205	ENST00000466359	SETX	Q7Z333	2677 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	AHCTF1	Q8WYP5	2266 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359		A8MT66	165 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	NPIPB8	E9PQR5	432 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359		H7BY64	318 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	UBXN8	O00124	270 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	TK2	O00142	265 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	DYNC1I1	O14576	645 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	KLF11	O14901	512 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	POLR1C	O15160	346 aa	Predicted RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ZZEF1	O43149	2961 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	TRIM13	O60858	407 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	CTSV	O60911	334 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	H2AFY	O75367	372 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	CLEC3A	O75596	197 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	RASSF9	O75901	435 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GUCA1C	O95843	209 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SYF2	O95926	243 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	OTC	P00480	354 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SERPINA6	P08185	405 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	CYC1	P08574	325 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	FGF4	P08620	206 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	MYL2	P10916	166 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GFAP	P14136	432 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	FOLR1	P15328	257 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PCSK2	P16519	638 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	MAG	P20916	626 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	IL10	P22301	178 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GRK2	P25098	689 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	TSFM	P43897	325 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SCTR	P47872	440 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GLRB	P48167	497 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ARL4D	P49703	201 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ARSF	P54793	590 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PKNOX1	P55347	436 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PPP1CA	P62136	330 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	LCP2	Q13094	533 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GRM7	Q14831	915 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ADPRM	Q3LIE5	342 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	CRTC2	Q53ET0	693 aa	Predicted RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ZNF678	Q5SXM1	525 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PHF19	Q5T6S3	580 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	LIPM	Q5VYY2	423 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	RHBDD2	Q6NTF9	364 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SUSD1	Q6UWL2	747 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	TMIGD1	Q6UXZ0	262 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	MBOAT1	Q6ZNC8	495 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	FAM92B	Q6ZTR7	304 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PPP1R3B	Q86XI6	285 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	DTX1	Q86Y01	620 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SRRM1	Q8IYB3	904 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	KRT78	Q8N1N4	520 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ZNF655	Q8N720	491 aa	Predicted RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	MFSD9	Q8NBP5	474 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	C7orf57	Q8NEG2	295 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	NT5C	Q8TCD5	201 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PROKR1	Q8TCW9	393 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	TCP10L	Q8TDR4	215 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ZNF483	Q8TF39	744 aa	Predicted RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SREK1	Q8WXA9	508 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GATA6	Q92908	595 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	NEIL2	Q969S2	332 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	REPS1	Q96D71	796 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	METTL2A	Q96IZ6	378 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ATP6V1G3	Q96LB4	118 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	PRAP1	Q96NZ9	151 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ZNF382	Q96SR6	550 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	RUFY1	Q96T51	708 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	CCT7	Q99832	543 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	EGFL8	Q99944	293 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	C17orf62	Q9BQA9	187 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	AIF1L	Q9BQI0	150 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SCNM1	Q9BWG6	230 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	IQCG	Q9H095	443 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ACBD3	Q9H3P7	528 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	FANCE	Q9HB96	536 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	SLC6A20	Q9NP91	592 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	MED4	Q9NPJ6	270 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ASCL3	Q9NQ33	180 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	THSD1	Q9NS62	852 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	FGF21	Q9NSA1	209 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	ZNF358	Q9NW07	568 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	WWOX	Q9NZC7	414 aa		5.67	□□□□□ -1.5
NFX1-205	ENST00000466359	CPSF2	Q9P2I0	782 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms