RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SOWAHCQ53LP3 525 aaPredicted RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 ARMC4Q5T2S8 1044 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 C7orf34Q96L11 122 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 KCNC2Q96PR1 638 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 TTPALQ9BTX7 342 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 ADPRHL2Q9NX46 363 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 ERVK13-1Q9NX77 482 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 UBA2Q9UBT2 640 aaPredicted RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 PADI2Q9Y2J8 665 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 PCDHB5Q9Y5E4 795 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 ANKRD66B4E2M5 251 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 ARHGAP33O14559 1287 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 EPN2O95208 641 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 IGLV3-27P01718 113 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 STSP08842 583 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 DGKAP23743 735 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 PTX3P26022 381 aaPredicted RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 MZF1P28698 734 aaPredicted RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 RACK1P63244 317 aaKnown RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 MTAPQ13126 283 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 TBRG1Q3YBR2 411 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 CCDC58Q4VC31 144 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 MRPL10Q7Z7H8 261 aaKnown RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 RNF130Q86XS8 419 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 ANGPTL6Q8NI99 470 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 SUSD3Q96L08 255 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 RETREG1Q9H6L5 497 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 GPR83Q9NYM4 423 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 GPRC5BQ9NZH0 403 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 PPT2Q9UMR5 302 aa19.13■□□□□ 0.65
SDF4-205ENST00000465727 TDRD15B5MCY1 1934 aaKnown RBP19.13■□□□□ 0.65
SDF4-205ENST00000465727 CLDN9O95484 217 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RPS3P23396 243 aaKnown RBP eCLIP19.12■□□□□ 0.659e-8■■■■□ 26.7
SDF4-205ENST00000465727 TNFSF8P32971 234 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 KIR3DL1P43629 444 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 C19orf57Q0VDD7 668 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 ST3GAL4Q11206 333 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 PTRHD1Q6GMV3 140 aaKnown RBP19.12■□□□□ 0.65
SDF4-205ENST00000465727 GPR155Q7Z3F1 870 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 PTOV1Q86YD1 416 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RAVER1Q8IY67 606 aaKnown RBP19.12■□□□□ 0.65
SDF4-205ENST00000465727 C8orf48Q96LL4 319 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RIPOR3Q96MK2 946 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 UROC1Q96N76 676 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 TRNT1Q96Q11 434 aaKnown RBP19.12■□□□□ 0.65
SDF4-205ENST00000465727 CDCA4Q9BXL8 241 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RDH14Q9HBH5 336 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 SMURF1Q9HCE7 757 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 PRDM8Q9NQV8 689 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 PAQR5Q9NXK6 330 aaPredicted RBP19.12■□□□□ 0.65
SDF4-205ENST00000465727 RNF181Q9P0P0 153 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 POFUT2Q9Y2G5 429 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 A0A0U1RQS6 177 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 MEIOCA2RUB1 952 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 NPIPB8E9PQR5 432 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 CCRL2O00421 344 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 CTDSP2O14595 271 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 ADAMDEC1O15204 470 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 ENGP17813 658 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 GABRB1P18505 474 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 GDF5P43026 501 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RGRP47804 291 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 BNC1Q01954 994 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RING1Q06587 406 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 YIF1BQ5BJH7 314 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 HASPINQ8TF76 798 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 RNF170Q96K19 258 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 CIPCQ9C0C6 399 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 CLPBQ9H078 707 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 MARCH2Q9P0N8 246 aa19.12■□□□□ 0.65
SDF4-205ENST00000465727 ANXA8P13928 327 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 ZNF7P17097 686 aaPredicted RBP19.11■□□□□ 0.65
SDF4-205ENST00000465727 SDC1P18827 310 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 HOXC8P31273 242 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 RFX2P48378 723 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 MRPS6P82932 125 aaKnown RBP19.11■□□□□ 0.65
SDF4-205ENST00000465727 GALK2Q01415 458 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 GRB14Q14449 540 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 SLC39A12Q504Y0 691 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 GNASQ5JWF2 1037 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 NOXA1Q86UR1 476 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 CMTM7Q96FZ5 175 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 FUBP3Q96I24 572 aaKnown RBP eCLIP19.11■□□□□ 0.65
SDF4-205ENST00000465727 TSSK3Q96PN8 268 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 PANX1Q96RD7 426 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 KATNAL1Q9BW62 490 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 APOL5Q9BWW9 433 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 RUBCNLQ9H714 662 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 BPIFA1Q9NP55 256 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 AMBNQ9NP70 447 aa19.11■□□□□ 0.65
SDF4-205ENST00000465727 TLR8Q9NR97 1041 aaKnown RBP19.11■□□□□ 0.65
SDF4-205ENST00000465727 ABI2Q9NYB9 513 aaPredicted RBP19.11■□□□□ 0.65
SDF4-205ENST00000465727 CNOT2Q9NZN8 540 aaKnown RBP19.11■□□□□ 0.65
SDF4-205ENST00000465727 A0A0D9SEW6 157 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 EFCAB10A6NFE3 127 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 A8MVJ9 347 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 CTPS1P17812 591 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 CYP2A7P20853 494 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 RRM2P31350 389 aa19.1■□□□□ 0.65
SDF4-205ENST00000465727 SRSF11Q05519 484 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms