RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 KCNMB4Q86W47 210 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 RERGQ96A58 199 aaPredicted RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 THOC3Q96J01 351 aaKnown RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 FAM167BQ9BTA0 163 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 LHPPQ9H008 270 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 TRPC4Q9UBN4 977 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 PCYOX1Q9UHG3 505 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 SNX12Q9UMY4 172 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 COPG1Q9Y678 874 aaKnown RBP17.95■□□□□ 0.46
SF3A1-205ENST00000463818 MAST4O15021 2626 aa17.95■□□□□ 0.46
SF3A1-205ENST00000463818 NAV2Q8IVL1 2488 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 IGLV3-12A0A075B6K2 115 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 H7BY64 318 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 CES2O00748 559 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 FFAR3O14843 346 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 GPR42O15529 346 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 CBX6O95503 412 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 EZRP15311 586 aaKnown RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 PGAM1P18669 254 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 IMPA1P29218 277 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 EMP2P54851 167 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 TIAL1Q01085 375 aaKnown RBP eCLIP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 PTK6Q13882 451 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 NR6A1Q15406 480 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 GARNL3Q5VVW2 1013 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 IGFL2Q6UWQ7 119 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 PLD3Q8IV08 490 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 C2CD4AQ8NCU7 369 aaPredicted RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 PRR7Q8TB68 274 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 DNAJB14Q8TBM8 379 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 EEF1AKMT1Q8WVE0 214 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 C8orf44Q96CB5 159 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 MVB12AQ96EY5 273 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 MMABQ96EY8 250 aaPredicted RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 PRAP1Q96NZ9 151 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 EBNA1BP2Q99848 306 aaKnown RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 CUEDC1Q9NWM3 386 aaPredicted RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 TRMT1Q9NXH9 659 aaKnown RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 ASIC3Q9UHC3 531 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 TRMT6Q9UJA5 497 aaKnown RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 CSAG2Q9Y5P2 127 aa17.94■□□□□ 0.46
SF3A1-205ENST00000463818 USP9YO00507 2555 aaPredicted RBP17.94■□□□□ 0.46
SF3A1-205ENST00000463818 ESPL1Q14674 2120 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 SHANK1Q9Y566 2161 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 EIF3FO00303 357 aaPredicted RBP17.93■□□□□ 0.46
SF3A1-205ENST00000463818 TXNDC9O14530 226 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 DNALI1O14645 258 aaPredicted RBP17.93■□□□□ 0.46
SF3A1-205ENST00000463818 HAT1O14929 419 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 PRPF4O43172 522 aaKnown RBP eCLIP17.93■□□□□ 0.46
SF3A1-205ENST00000463818 FOXS1O43638 330 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 BANF1O75531 89 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 HPP00738 406 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 ACPPP15309 386 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 GABRB3P28472 473 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 SLC26A3P40879 764 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 DHX9Q08211 1270 aaKnown RBP17.93■□□□□ 0.46
SF3A1-205ENST00000463818 DSG2Q14126 1118 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 CRYMQ14894 314 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 UGT3A1Q6NUS8 523 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 ARHGEF39Q8N4T4 335 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 MCOLN3Q8TDD5 553 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 NDNQ99608 321 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 WDR77Q9BQA1 342 aaPredicted RBP17.93■□□□□ 0.46
SF3A1-205ENST00000463818 DDX47Q9H0S4 455 aaKnown RBP17.93■□□□□ 0.46
SF3A1-205ENST00000463818 ZNF160Q9HCG1 818 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 TMEM184CQ9NVA4 438 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 PCDHGA10Q9Y5H3 936 aa17.93■□□□□ 0.46
SF3A1-205ENST00000463818 A0A0A6YYC8 382 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-205ENST00000463818 I3L1I5 382 aaPredicted RBP17.92■□□□□ 0.46
SF3A1-205ENST00000463818 MAP2K7O14733 419 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 ANXA5P08758 320 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 MSS51Q4VC12 460 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 NDUFAF7Q7L592 441 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 PCGF5Q86SE9 256 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 IGDCC3Q8IVU1 814 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 AMER3Q8N944 861 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 PPP4R1Q8TF05 950 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 SSC4DQ8WTU2 575 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 CCDC138Q96M89 665 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 ADAMTS6Q9UKP5 1117 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 PDE10AQ9Y233 779 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 NTNG1Q9Y2I2 539 aa17.92■□□□□ 0.46
SF3A1-205ENST00000463818 IDSB3KWA1 339 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 P2RX6O15547 441 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 KLHL18O94889 574 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 TTC4O95801 387 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 AHSGP02765 367 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 STATHP02808 62 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 HEXBP07686 556 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 HRH2P25021 359 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 CXCR2P25025 360 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 RGS4P49798 205 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 SYT16Q17RD7 645 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 BBS9Q3SYG4 887 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 SPANXN3Q5MJ09 141 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 FAAH2Q6GMR7 532 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 PAQR3Q6TCH7 311 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 ISLR2Q6UXK2 745 aa17.91■□□□□ 0.46
SF3A1-205ENST00000463818 LINC00696Q6ZRV3 163 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms