RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 MRPL11Q9Y3B7 192 aaKnown RBP0.29□□□□□ -2.36
TMEM56-204ENST00000463375 GRIP1Q9Y3R0 1128 aa0.29□□□□□ -2.36
TMEM56-204ENST00000463375 RIPOR2Q9Y4F9 1068 aa0.29□□□□□ -2.36
TMEM56-204ENST00000463375 CYP46A1Q9Y6A2 500 aa0.29□□□□□ -2.36
TMEM56-204ENST00000463375 ASTN1O14525 1302 aa0.29□□□□□ -2.36
TMEM56-204ENST00000463375 PCDH11YQ9BZA8 1340 aa0.29□□□□□ -2.36
TMEM56-204ENST00000463375 KDM3AQ9Y4C1 1321 aa0.29□□□□□ -2.36
TMEM56-204ENST00000463375 TRAV9-2A0A087WT02 112 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 A0A0G2JLM5 398 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 TRBV5-5A0A0J9YX44 114 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 A0A0U1RQK1 487 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ZSCAN5CA6NGD5 496 aaPredicted RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 RNF103O00237 685 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 SLC1A7O00341 560 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 HOXC11O43248 304 aaPredicted RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 SSX4O60224 188 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 MTRF1O75570 445 aaKnown RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 PIGRP01833 764 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 HCKP08631 526 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ARL4CP56559 192 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 PPP2R2BQ00005 443 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 CEBPZQ03701 1054 aaKnown RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF415Q09FC8 603 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 LMOD3Q0VAK6 560 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 BAK1Q16611 211 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 TMEM266Q2M3C6 531 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 TMEM198Q66K66 360 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF600Q6ZNG1 722 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 FBXO16Q8IX29 292 aaPredicted RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 TMEM61Q8N0U2 210 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 SPICE1Q8N0Z3 855 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF433Q8N7K0 673 aaPredicted RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF491Q8N8L2 437 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 LINC01555Q8NAE3 123 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 OR5M8Q8NGP6 311 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 IL22RA2Q969J5 263 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 NABP1Q96AH0 204 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 OR6C1Q96RD1 312 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 STRADBQ9C0K7 418 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 DNAI2Q9GZS0 605 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ZNF331Q9NQX6 463 aaPredicted RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 GKN1Q9NS71 199 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 ELF5Q9UKW6 265 aaPredicted RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 MRPS18CQ9Y3D5 142 aaKnown RBP0.28□□□□□ -2.36
TMEM56-204ENST00000463375 NME7Q9Y5B8 376 aa0.28□□□□□ -2.36
TMEM56-204ENST00000463375 TRBV4-1A0A0J9YWV2 114 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 F5H423 210 aaPredicted RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 SNAI2O43623 268 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 F9P00740 461 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 IGHG1P01857 330 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 MYL1P05976 194 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 TBPP20226 339 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 AADACP22760 399 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 GDF1P27539 372 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 SLC1A4P43007 532 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 IST1P53990 364 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 RARSP54136 660 aaKnown RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 DCDC1P59894 354 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 MEF2BQ02080 365 aaPredicted RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 ITPK1Q13572 414 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 TGIF1Q15583 401 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 MLF2Q15773 248 aaPredicted RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 LY6EQ16553 131 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 POM121L1PQ3SYA9 428 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 OTPQ5XKR4 325 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 INO80CQ6PI98 192 aaPredicted RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 CPOQ8IVL8 374 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 RPAP2Q8IXW5 612 aaPredicted RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 TMEM116Q8NCL8 245 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 OR7A2PQ8NGA2 310 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 INTS12Q96CB8 462 aaKnown RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 FAF2Q96CS3 445 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 HDAC11Q96DB2 347 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 UBXN10Q96LJ8 280 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 FAM20AQ96MK3 541 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 TECTBQ96PL2 329 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 DPAGT1Q9H3H5 408 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 DNAJC18Q9H819 358 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 IL1RAPQ9NPH3 570 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 ARMCX1Q9P291 453 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 PILRAQ9UKJ1 303 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 PRDM4Q9UKN5 801 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 TBX20Q9UMR3 447 aa0.27□□□□□ -2.37
TMEM56-204ENST00000463375 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
TMEM56-204ENST00000463375 HEPACAM2A8MVW5 462 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 B4DXG7 233 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 C2CD4DB7Z1M9 353 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 EEF2KO00418 725 aaKnown RBP0.26□□□□□ -2.37
TMEM56-204ENST00000463375 SCAMP1O15126 338 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 ZNF749O43361 778 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 RHBDL1O75783 438 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 ATP1B1P05026 303 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 GPR183P32249 361 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 ICAM3P32942 547 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 CHKAP35790 457 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 EFNA3P52797 238 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 TPD52P55327 224 aaPredicted RBP0.26□□□□□ -2.37
TMEM56-204ENST00000463375 RIPPLY3P57055 190 aa0.26□□□□□ -2.37
TMEM56-204ENST00000463375 RPL7AP62424 266 aaKnown RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms