RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 ZBED4O75132 1171 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 ZNF821O75541 412 aaPredicted RBP3.8□□□□□ -1.8
UBA3-204ENST00000461522 SLC25A12O75746 678 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 SNX4O95219 450 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 HSPA4LO95757 839 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 CALM1P0DP23 149 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 CALM2P0DP24 149 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 CALM3P0DP25 149 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 HOXA13P31271 388 aaPredicted RBP3.8□□□□□ -1.8
UBA3-204ENST00000461522 BACE1P56817 501 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 TAS2R40P59535 323 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 C1QTNF8P60827 252 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 POLR2FP61218 127 aaKnown RBP3.8□□□□□ -1.8
UBA3-204ENST00000461522 TFAP4Q01664 338 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 UBXN1Q04323 297 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 PPIL2Q13356 520 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 SCARB2Q14108 478 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 VGLL4Q14135 290 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 DUOXA1Q1HG43 343 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 DEFB115Q30KQ5 88 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 KIAA1644Q3SXP7 199 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 ODF2Q5BJF6 829 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 TBC1D21Q8IYX1 336 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 NAT8LQ8N9F0 302 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 DRAXINQ8NBI3 349 aaPredicted RBP3.8□□□□□ -1.8
UBA3-204ENST00000461522 PCYOX1LQ8NBM8 494 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 TMEM116Q8NCL8 245 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 PPP4R1Q8TF05 950 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 SGCDQ92629 289 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 ART5Q96L15 291 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 PSD2Q9BQI7 771 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 CCDC68Q9H2F9 335 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 RAD21L1Q9H4I0 556 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 PDZD7Q9H5P4 517 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 MTMR10Q9NXD2 777 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 LAMP5Q9UJQ1 280 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 TRAF3IP3Q9Y228 551 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 RNF215Q9Y6U7 377 aa3.8□□□□□ -1.8
UBA3-204ENST00000461522 A0A1B0GUL6 1792 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 ADAMTSL1Q8N6G6 1762 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 ERICH2A1L162 156 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 A6NL46 340 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 A6NLC8 198 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 M0QX08 132 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 CLIC2O15247 247 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 HCRTR2O43614 444 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 AHCYL1O43865 530 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 CRLF1O75462 422 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 TGDSO95455 350 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 GH2P01242 217 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 LIPFP07098 398 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 TOP1P11387 765 aaKnown RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 GNAZP19086 355 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 PBX3P40426 434 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 HNF4AP41235 474 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 HUNKP57058 714 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 AP1B1Q10567 949 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 PRPF4BQ13523 1007 aaKnown RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 MEA1Q16626 185 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 ZFP69Q49AA0 526 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 ASPRV1Q53RT3 343 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 CCDC122Q5T0U0 273 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 LRIF1Q5T3J3 769 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 FAM205BPQ63HN1 556 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 BLOC1S2Q6QNY1 142 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 TSPAN33Q86UF1 283 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 C1orf52Q8N6N3 182 aaKnown RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 ZNF274Q96GC6 653 aaPredicted RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 CCDC114Q96M63 670 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 TREX2Q9BQ50 279 aaPredicted RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 UBAC1Q9BSL1 405 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 PI4K2AQ9BTU6 479 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 TSPYL1Q9H0U9 437 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 VPS37BQ9H9H4 285 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 TRPV4Q9HBA0 871 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 EPB41L5Q9HCM4 733 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 XAB2Q9HCS7 855 aaKnown RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 FGF22Q9HCT0 170 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 UBN1Q9NPG3 1134 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 SLC38A7Q9NVC3 462 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 QPCTLQ9NXS2 382 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 MRPL11Q9Y3B7 192 aaKnown RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 KIF3AQ9Y496 699 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 YIPF1Q9Y548 306 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 DDX49Q9Y6V7 483 aaKnown RBP3.79□□□□□ -1.8
UBA3-204ENST00000461522 ZHX2Q9Y6X8 837 aa3.79□□□□□ -1.8
UBA3-204ENST00000461522 C15orf62A8K5M9 175 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 F5H6K3 240 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 IFIT3O14879 490 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 WDR46O15213 610 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 RANBP6O60518 1105 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 KRT19P08727 400 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 GZMAP12544 262 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 CEACAM1P13688 526 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 LIFP15018 202 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 CD9P21926 228 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 HRH2P25021 359 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 ATP5DP30049 168 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 RDXP35241 583 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms