RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 MS4A10Q96PG2 267 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 WNT5BQ9H1J7 359 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 CCDC68Q9H2F9 335 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 PPIL3Q9H2H8 161 aaKnown RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 GHITMQ9H3K2 345 aa2.01□□□□□ -2.09
SYPL1-203ENST00000460770 NFKBIL1Q9UBC1 381 aaPredicted RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 MAGED1Q9Y5V3 778 aaPredicted RBP2.01□□□□□ -2.09
SYPL1-203ENST00000460770 A0A087WWV3 80 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 hCG_1807616A0A1W2PRN6 198 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 ZNF840PA6NDX5 716 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 K7EQD1 137 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SURF4O15260 269 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 PTP4A3O75365 173 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 CREG1O75629 220 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 DDHD2O94830 711 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 DNTTP04053 509 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 ELAVL4P26378 380 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 ETV5P41161 510 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 RPL34P49207 117 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 DNA2P51530 1060 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SUOXP51687 545 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 MRPL12P52815 198 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 PNLIPRP2P54317 469 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 ERVK-16P61578 105 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 MC1RQ01726 317 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 CHAF1BQ13112 559 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 PSMD6Q15008 389 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 FAM189A2Q15884 450 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SYT14P1Q58G82 188 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SNX30Q5VWJ9 437 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 TMUB2Q71RG4 321 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 LGI2Q8N0V4 545 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 FBXO39Q8N4B4 442 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 OR7A2PQ8NGA2 310 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SLAMF9Q96A28 289 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 CNRIP1Q96F85 164 aaPredicted RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 SEPHS2Q99611 448 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SLF1Q9BQI6 1058 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 MGME1Q9BQP7 344 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SRSF8Q9BRL6 282 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 MAK16Q9BXY0 300 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 FTOQ9C0B1 505 aaKnown RBP eCLIP2□□□□□ -2.09
SYPL1-203ENST00000460770 RSPH9Q9H1X1 276 aaPredicted RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 ALDH8A1Q9H2A2 487 aaPredicted RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 PNNQ9H307 717 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 SYNCQ9H7C4 482 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SH3GLB2Q9NR46 395 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 SEC63Q9UGP8 760 aaKnown RBP2□□□□□ -2.09
SYPL1-203ENST00000460770 RPS6KA6Q9UK32 745 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 GTF3C4Q9UKN8 822 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 PLAGL1Q9UM63 463 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 PCDHGB4Q9UN71 923 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 CHKBQ9Y259 395 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 R4GN57 208 aa2□□□□□ -2.09
SYPL1-203ENST00000460770 IGSF1Q8N6C5 1336 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 PTGES3LE9PB15 166 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 MEIS2O14770 477 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 OR10H2O60403 315 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 SNAP91O60641 907 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 GJB3O75712 270 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 TSPAN9O75954 239 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ZWINTO95229 277 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 APOA4P06727 396 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 PCP11498 1178 aaKnown RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 GP1BBP13224 206 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 PORP16435 677 aaPredicted RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 MGMTP16455 207 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 AADACP22760 399 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 JAK1P23458 1154 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 HOXD13P35453 343 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 SOX3P41225 446 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 OR3A2P47893 321 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 CLCN4P51793 760 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ZNF75DP51815 510 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 PPIAP62937 165 aaKnown RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 CALD1Q05682 793 aaKnown RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ZNF415Q09FC8 603 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 TRIM29Q14134 588 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 CA9Q16790 459 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 KRT79Q5XKE5 535 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 SLC30A6Q6NXT4 461 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 CLEC17AQ6ZS10 378 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 TIPARPQ7Z3E1 657 aaKnown RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ANKRD23Q86SG2 305 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 PRR22Q8IZ63 422 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 C17orf53Q8N3J3 647 aaPredicted RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 CCDC191Q8NCU4 936 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 OR52B6Q8NGF0 335 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 AGAP11Q8TF27 550 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 NSMAFQ92636 917 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ATP6V1E2Q96A05 226 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 NSUN4Q96CB9 384 aaKnown RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 RADILQ96JH8 1075 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 FAM20AQ96MK3 541 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ZMAT2Q96NC0 199 aaKnown RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 BAG1Q99933 345 aaPredicted RBP1.99□□□□□ -2.09
SYPL1-203ENST00000460770 KIFC3Q9BVG8 833 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 MXD3Q9BW11 206 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ITPAQ9BY32 194 aa1.99□□□□□ -2.09
SYPL1-203ENST00000460770 ZMYND12Q9H0C1 365 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms