RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SRFP11831 508 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 COL9A1P20849 921 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 AGTR2P50052 363 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 IDH3AP50213 366 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 HK3P52790 923 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 CTSCP53634 463 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 SYTL3Q4VX76 610 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 ANKS6Q68DC2 871 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 XKR5Q6UX68 686 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 TRAPPC5Q8IUR0 188 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 CENPSQ8N2Z9 138 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 LENG8Q96PV6 779 aaPredicted RBP10.08□□□□□ -0.8
HERC4-207ENST00000460168 ASB2Q96Q27 587 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 NMUR2Q9GZQ4 415 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 OR2AG1Q9H205 316 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 THEGQ9P2T0 379 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 VTI1BQ9UEU0 232 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 NDRG2Q9UN36 371 aaKnown RBP10.08□□□□□ -0.8
HERC4-207ENST00000460168 TRIM33Q9UPN9 1127 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 PCDHGA10Q9Y5H3 936 aa10.08□□□□□ -0.8
HERC4-207ENST00000460168 FCHO1O14526 889 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 KLK8O60259 260 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ESRRBO95718 433 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 BAG2O95816 211 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 RECKO95980 971 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PCCBP05166 539 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ACADMP11310 421 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SOX6P35712 828 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 POU3F4P49335 361 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PRLHRP49683 370 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ST13P50502 369 aaKnown RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 FOXK1P85037 733 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 CLCQ05315 142 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 TDGQ13569 410 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 GTF2H3Q13889 308 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PPP1R3AQ16821 1122 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 GRAMD1BQ3KR37 738 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PLEKHS1Q5SXH7 462 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PTCRAQ6ISU1 281 aaPredicted RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 TMEM220Q6QAJ8 160 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SATL1Q86VE3 508 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 NLRP8Q86W28 1048 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 STX12Q86Y82 276 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PLA2G15Q8NCC3 412 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 MAPK15Q8TD08 544 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ESAMQ96AP7 390 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 TMEM159Q96B96 161 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 MSANTD3Q96H12 275 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 NSUN5Q96P11 429 aaKnown RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 ACAT2Q9BWD1 397 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 OSBPL6Q9BZF3 934 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 MID1IP1Q9NPA3 183 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SEMA4BQ9NPR2 832 aaPredicted RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 ZNF624Q9P2J8 865 aaPredicted RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 NUP50Q9UKX7 468 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 CNOT6Q9ULM6 557 aaKnown RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 OARD1Q9Y530 152 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 FAM172BPA6NC97 362 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 TMEM202A6NGA9 273 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 LINC01387J3KSC0 135 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 UBFD1O14562 309 aaKnown RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 GIPC1O14908 333 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SSX5O60225 188 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 CCDC22O60826 627 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PAK4O96013 591 aaPredicted RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 RPS17P08708 135 aaKnown RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 TMEM11P17152 192 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 IDUAP35475 653 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 LCP2Q13094 533 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SNTA1Q13424 505 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 CCINQ13939 588 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SLC9B1Q4ZJI4 515 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 EOGTQ5NDL2 527 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SLX4IPQ5VYV7 408 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 PNCKQ6P2M8 343 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 EPGNQ6UW88 154 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 CYHR1Q6ZMK1 362 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 TMPRSS9Q7Z410 1059 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 VRK3Q8IV63 474 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ADGRG5Q8IZF4 528 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 KIF2BQ8N4N8 673 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 UTP4Q969X6 686 aaKnown RBP10.07□□□□□ -0.8
HERC4-207ENST00000460168 CCM2Q9BSQ5 444 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ARMC7Q9H6L4 198 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 EPS8L2Q9H6S3 715 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 TRIM39Q9HCM9 518 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ATP13A2Q9NQ11 1180 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 LUZP4Q9P127 313 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ARMCX1Q9P291 453 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 SCML1Q9UN30 329 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 VPS4AQ9UN37 437 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 ZNF175Q9Y473 711 aa10.07□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3DA0A087WVF3 549 aa10.06□□□□□ -0.8
HERC4-207ENST00000460168 TBC1D3IA0A087WXS9 549 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms