RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 EVI2BP34910 448 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SLC19A1P41440 591 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 RPA4Q13156 261 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CBX3Q13185 183 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 NAE1Q13564 534 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 COL9A2Q14055 689 aaPredicted RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 SHBQ15464 509 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 PTCHD3Q3KNS1 767 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 LIN54Q6MZP7 749 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 IGF2-ASQ6U949 168 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 GATAD2AQ86YP4 633 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ZNF781Q8N8C0 355 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 GOLM1Q8NBJ4 401 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 PDPRQ8NCN5 879 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 OR52B6Q8NGF0 335 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 GOT1L1Q8NHS2 421 aaPredicted RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 MCOLN3Q8TDD5 553 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ZNF480Q8WV37 535 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 MED8Q96G25 268 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ARL5BQ96KC2 179 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 HIST1H2AHQ96KK5 128 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 PPP1R36Q96LQ0 422 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 PPM1MQ96MI6 270 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 FOPNLQ96NB1 174 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 KCNA7Q96RP8 456 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 HIST1H2AJQ99878 128 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ELAC2Q9BQ52 826 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 H2AFJQ9BTM1 129 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 INTS7Q9NVH2 962 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 WWOXQ9NZC7 414 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 NUDT4Q9NZJ9 180 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 STOX2Q9P2F5 926 aaPredicted RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 ACSL5Q9ULC5 683 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SH2B3Q9UQQ2 575 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 PLXND1Q9Y4D7 1925 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 DCHS1Q96JQ0 3298 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 A0A1B0GTW7 788 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 GMNCA6NCL1 334 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 E2F3O00716 465 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 YY2O15391 372 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SNNO75324 88 aaPredicted RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 EPORP19235 508 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CYP2A7P20853 494 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 DRD4P21917 467 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 IMPA1P29218 277 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CTSKP43235 329 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ALDH18A1P54886 795 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 FOXA1P55317 472 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ABCE1P61221 599 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 SH3BP2P78314 561 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 MRPS15P82914 257 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 OCRLQ01968 901 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 GNA13Q14344 377 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CFAP157Q5JU67 520 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 WLSQ5T9L3 541 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 AGTRAPQ6RW13 159 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 IQCHQ86VS3 1027 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 NAGSQ8N159 534 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SLC25A45Q8N413 288 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 NAXEQ8NCW5 288 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ZNF548Q8NEK5 533 aaPredicted RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 FBXO30Q8TB52 745 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CHMP6Q96FZ7 201 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ZC3H10Q96K80 434 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
USP39-210ENST00000459775 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ACAT2Q9BWD1 397 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 EHD1Q9H4M9 534 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CCDC134Q9H6E4 229 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 CRLF2Q9HC73 371 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SEMA4GQ9NTN9 838 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ZDHHC2Q9UIJ5 367 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 ZNF225Q9UK10 706 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 PCTPQ9UKL6 214 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 SLC22A14Q9Y267 594 aa9.98□□□□□ -0.81
USP39-210ENST00000459775 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 TMEM8BA6NDV4 472 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 ALG1L2C9J202 215 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PRAMEF4O60810 478 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 TMEM127O75204 238 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 HSPA4LO95757 839 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 JUNP05412 331 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 PGRP06401 933 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PROS1P07225 676 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 ANXA5P08758 320 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 F3P13726 295 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 TMEM11P17152 192 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PSMB5P28074 263 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 SOX6P35712 828 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 MAZP56270 477 aaKnown RBP9.97□□□□□ -0.81
USP39-210ENST00000459775 DNAJB13P59910 316 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 NFKB2Q00653 900 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 KRT33BQ14525 404 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 CEP78Q5JTW2 689 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 VWA5B1Q5TIE3 1220 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 PRAMEF9Q5VWM5 478 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 CLEC6AQ6EIG7 209 aa9.97□□□□□ -0.81
USP39-210ENST00000459775 IYDQ6PHW0 289 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms