RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 TRIM29Q14134 588 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 OPCMLQ14982 345 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 FASTKD3Q14CZ7 662 aaKnown RBP2.54□□□□□ -2
SCARNA18-201ENST00000459004 RASA2Q15283 850 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 TAB1Q15750 504 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 GPR33Q49SQ1 333 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 TAF1BQ53T94 588 aaPredicted RBP2.54□□□□□ -2
SCARNA18-201ENST00000459004 SLC30A6Q6NXT4 461 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 RPUSD3Q6P087 351 aaKnown RBP2.54□□□□□ -2
SCARNA18-201ENST00000459004 NOTUMQ6P988 496 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 CHST3Q7LGC8 479 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 PRSS33Q8NF86 280 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 METTL21AQ8WXB1 218 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 SPSB1Q96BD6 273 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 ZNF300Q96RE9 604 aaPredicted RBP2.54□□□□□ -2
SCARNA18-201ENST00000459004 PIGQQ9BRB3 760 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 PYGO2Q9BRQ0 406 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 TMX4Q9H1E5 349 aaPredicted RBP2.54□□□□□ -2
SCARNA18-201ENST00000459004 ACTL8Q9H568 366 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 SPHK2Q9NRA0 654 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 NUDT4Q9NZJ9 180 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 THEGQ9P2T0 379 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 PRDM4Q9UKN5 801 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 CCL27Q9Y4X3 112 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 CACNA1FO60840 1977 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 MYH15Q9Y2K3 1946 aa2.54□□□□□ -2
SCARNA18-201ENST00000459004 COL5A2P05997 1499 aaPredicted RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 IL16Q14005 1332 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 URADA6NGE7 173 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 A8MXE2 369 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 DIAPH2O60879 1101 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 DNTTP04053 509 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 ATP1B1P05026 303 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 KRT20P35900 424 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 OR3A2P47893 321 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 NUCB1Q02818 461 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 RASGEF1BQ0VAM2 473 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 CALCOCO2Q13137 446 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 MTF1Q14872 753 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 TMEM132DQ14C87 1099 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 NONOQ15233 471 aaKnown RBP eCLIP2.53□□□□□ -2
SCARNA18-201ENST00000459004 SNAI3Q3KNW1 292 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 CTR9Q6PD62 1173 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 CHMP1BQ7LBR1 199 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 RCOR2Q8IZ40 523 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 LYG1Q8N1E2 194 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 ANKRD13CQ8N6S4 541 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 KLHDC1Q8N7A1 406 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 CAMKVQ8NCB2 501 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 OR5T2Q8NGG2 359 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 FAM222BQ8WU58 562 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 PIK3R3Q92569 461 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 EXT2Q93063 718 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 TSACCQ96A04 125 aaPredicted RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 PGM2Q96G03 612 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 ZNF558Q96NG5 402 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 EGFL8Q99944 293 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 SLC25A23Q9BV35 468 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 LRRC61Q9BV99 259 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 TDRD1Q9BXT4 1180 aaKnown RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 HOXD1Q9GZZ0 328 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 SDCBP2Q9H190 292 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 XAB2Q9HCS7 855 aaKnown RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.53□□□□□ -2
SCARNA18-201ENST00000459004 TEX10Q9NXF1 929 aaPredicted RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 ELF5Q9UKW6 265 aaPredicted RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 PA2G4Q9UQ80 394 aaKnown RBP2.53□□□□□ -2
SCARNA18-201ENST00000459004 MOB4Q9Y3A3 225 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 SELENOKQ9Y6D0 94 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 CSNK1G3Q9Y6M4 447 aa2.53□□□□□ -2
SCARNA18-201ENST00000459004 LOC105371242A0A075B767 164 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 SOCS3O14543 225 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 IDH3BO43837 385 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 PLOD3O60568 738 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 CEACAM4O75871 244 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 CCDC175P0C221 793 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 ACAT1P24752 427 aaKnown RBP2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 PSMA3P25788 255 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 CDC25CP30307 473 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 HSPA4P34932 840 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 SOX3P41225 446 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 UBASH3AP57075 661 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 SLC8A3P57103 927 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 IRX6P78412 446 aaPredicted RBP2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 COG2Q14746 738 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 PTGISQ16647 500 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 MOGAT2Q3SYC2 334 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 GLIPR1L2Q4G1C9 344 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 LACTB2Q53H82 288 aaPredicted RBP2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 CES4AQ5XG92 561 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 ENPP7Q6UWV6 458 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 KIF6Q6ZMV9 814 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 FCRLAQ7L513 359 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 CCDC186Q7Z3E2 898 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 GPC2Q8N158 579 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 CCDC89Q8N998 374 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 OR6J1Q8NGC5 347 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 OMA1Q96E52 524 aa2.52□□□□□ -2.01
SCARNA18-201ENST00000459004 AGAP4Q96P64 663 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms