RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 DIRAS3O95661 229 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 GLUD1P00367 558 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 HNRNPCL4P0DMR1 293 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 DNAJB1P25685 340 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 CHRNA3P32297 505 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 ACAA2P42765 397 aaKnown RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 GLUD2P49448 558 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 PCYT1AP49585 367 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 MBTD1Q05BQ5 628 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC34A1Q06495 639 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 IL10RBQ08334 325 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 MSLNQ13421 630 aaPredicted RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRADDQ15628 312 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 CALCRLQ16602 461 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 PRAMEF7Q5VXH5 474 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 OR4A47Q6IF82 309 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 DLEU7Q6UYE1 221 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 PACS1Q6VY07 963 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 RBM43Q6ZSC3 357 aaKnown RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 C5orf24Q7Z6I8 188 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 KMT5CQ86Y97 462 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 RYBPQ8N488 228 aaPredicted RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 TMED6Q8WW62 240 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 LINGO1Q96FE5 620 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 CDCA5Q96FF9 252 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 PGM2Q96G03 612 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 RBM41Q96IZ5 413 aaKnown RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 MAP3K3Q99759 626 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 NEURL2Q9BR09 285 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 NTPCRQ9BSD7 190 aaKnown RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 NTMT1Q9BV86 223 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 TEX13BQ9BXU2 312 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 TMEM245Q9H330 911 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 RIMS4Q9H426 269 aaPredicted RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZDHHC6Q9H6R6 413 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 RPF1Q9H9Y2 349 aaKnown RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 UBTD1Q9HAC8 227 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 NGBQ9NPG2 151 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZCCHC3Q9NUD5 404 aaKnown RBP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 DONSONQ9NYP3 566 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 PSORS1C1Q9UIG5 152 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 AURKCQ9UQB9 309 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 UBE4BO95155 1302 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 CGNL1Q0VF96 1302 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 NPHP3Q7Z494 1330 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 TTC3P53804 2025 aa3.87□□□□□ -1.79
HMGN3P1-201ENST00000453847 SPATA31D1Q6ZQQ2 1576 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 FAM149AA5PLN7 773 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ANTXRLA6NF34 631 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 NPIPA3F8WFD2 350 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 RASGRF2O14827 1237 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ARPC2O15144 300 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PSMD3O43242 534 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 SLC28A2O43868 658 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 STBD1O95210 358 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 BAG4O95429 457 aaKnown RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 TOMM40O96008 361 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PGK2P07205 417 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 MMP10P09238 476 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 NUDT17P0C025 328 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZCCHC18P0CG32 403 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 CCDC192P0DO97 292 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 B4GALT1P15291 398 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 AKT2P31751 481 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 MMP13P45452 471 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 GLIPR1P48060 266 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PDLIM4P50479 330 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 GMFBP60983 142 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 TRA2BP62995 288 aaKnown RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PMP22Q01453 160 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 RBBP7Q16576 425 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 SRSF7Q16629 238 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZNF260Q3ZCT1 412 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ZC2HC1CQ53FD0 456 aaPredicted RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 FAM122CQ6P4D5 195 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PSRC1Q6PGN9 363 aaPredicted RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ADGRD2Q7Z7M1 963 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 SYVN1Q86TM6 617 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ADCK1Q86TW2 530 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 RTN4RL2Q86UN3 420 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 CROCCP3Q8IVE0 287 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ADHFE1Q8IWW8 467 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 SRRM1Q8IYB3 904 aaKnown RBP3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 TBC1D21Q8IYX1 336 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PELI3Q8N2H9 469 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PPFIBP2Q8ND30 876 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 RDM1Q8NG50 284 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 HSD17B8Q92506 261 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 GGHQ92820 318 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 MTBPQ96DY7 904 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 OR1F2PQ96R84 312 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 ASCL2Q99929 193 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 RTP3Q9BQQ7 232 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 PIGQQ9BRB3 760 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 IDI2Q9BXS1 227 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 LAT2Q9GZY6 243 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 SHARPINQ9H0F6 387 aa3.86□□□□□ -1.79
HMGN3P1-201ENST00000453847 C10orf88Q9H8K7 445 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms