RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 COL21A1Q96P44 957 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 STRA6Q9BX79 667 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 MCOLN1Q9GZU1 580 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 VPS29Q9UBQ0 182 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 EIF3KQ9UBQ5 218 aaKnown RBP12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 BCKDKO14874 412 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 MTHFD1P11586 935 aaKnown RBP12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 NR2C1P13056 603 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 TMEM115Q12893 351 aaPredicted RBP12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 IFI44LQ53G44 452 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 IRF2BP2Q7Z5L9 587 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 SLAMF7Q9NQ25 335 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 GRHPRQ9UBQ7 328 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 E2F3O00716 465 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 GJB5O95377 273 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 AGR2O95994 175 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 CLCN4P51793 760 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 BNIP3Q12983 259 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 PYHIN1Q6K0P9 492 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 KIAA1161Q6NSJ0 714 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 CLEC1AQ8NC01 280 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 ASB6Q9NWX5 421 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 POFUT2Q9Y2G5 429 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 ROBO3Q96MS0 1386 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 MAP2K7O14733 419 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 METTL18O95568 372 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 BPGMP07738 259 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 CHRM5P08912 532 aaPredicted RBP12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 TMEM121BQ9BXQ6 578 aaPredicted RBP12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 PCDHGB7Q9Y5F8 929 aa12.4□□□□□ -0.42
AC006001.3-201ENST00000449307 L7N2F9 121 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 SCGB1D2O95969 90 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 MATN1P21941 496 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 EDNRAP25101 427 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 OR12D2P58182 307 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 VAMP2P63027 116 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 LINGO2Q7L985 606 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 ZNF615Q8N8J6 731 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 VNN3Q9NY84 501 aa12.4□□□□□ -0.43
AC006001.3-201ENST00000449307 MID1O15344 667 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 NCK1P16333 377 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ETV3P41162 512 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ADAM8P78325 824 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 RBPJQ06330 500 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 NNATQ16517 81 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ZBTB46Q86UZ6 589 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 FAM47BQ8NA70 645 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 POC5Q8NA72 575 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC5A11Q8WWX8 675 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 MINDY3Q9H8M7 445 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ZNF84P51523 738 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 OGDHQ02218 1023 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 DEFB133Q30KQ1 61 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 GXYLT1Q4G148 440 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 FSTL4Q6MZW2 842 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 SSX6Q7RTT6 188 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ZNF565Q8N9K5 539 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 OR9A1PQ8NGU1 263 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 GIPC3Q8TF64 312 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 DNAJA4Q8WW22 397 aaPredicted RBP12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ACTL8Q9H568 366 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 HCRTR2O43614 444 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 MEF2AQ02078 507 aaPredicted RBP12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 MXD1Q05195 221 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 C1orf52Q8N6N3 182 aaKnown RBP12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 FUT8Q9BYC5 575 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 NUP50Q9UKX7 468 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 AP4B1Q9Y6B7 739 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 TGM5O43548 720 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 PFKLP17858 780 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 DSTNP60981 165 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 RPS13P62277 151 aaKnown RBP12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 LMAN2Q12907 356 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 EXOC3L2Q2M3D2 409 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 PAQR3Q6TCH7 311 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 OR5T2Q8NGG2 359 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 LRRC4CQ9HCJ2 640 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 KCNS2Q9ULS6 477 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 SORCS3Q9UPU3 1222 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 BCL9LQ86UU0 1499 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 A0A0U1RQJ8 604 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 WNT7AO00755 349 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ABOP16442 354 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 EN2P19622 333 aaPredicted RBP12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 DHCR24Q15392 516 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 FAM129BQ96TA1 746 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 ATRNO75882 1429 aa12.39□□□□□ -0.43
AC006001.3-201ENST00000449307 IGLV3-22A0A075B6J6 115 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC30A4O14863 429 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 CER1O95813 267 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 F7P08709 466 aaPredicted RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 TACSTD2P09758 323 aa12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 GBX2P52951 348 aaPredicted RBP12.38□□□□□ -0.43
AC006001.3-201ENST00000449307 CST6Q15828 149 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms