RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ACADLP28330 430 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 MMP12P39900 470 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 RFX3P48380 749 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PXDC1Q5TGL8 231 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 MEDAGQ5VYS4 303 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 IFNL1Q8IU54 200 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 OR2T35Q8NGX2 323 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 OR8K3Q8NH51 312 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CREMQ03060 361 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 LY6KQ17RY6 165 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 EXOC3L2Q2M3D2 409 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CILP2Q8IUL8 1156 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 COLEC11Q9BWP8 271 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ELAC1Q9H777 363 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 SLC28A3Q9HAS3 691 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 COPZ2Q9P299 210 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 PADI2Q9Y2J8 665 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ARVCFO00192 962 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 TGM6O95932 706 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 HCAR3P49019 387 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 C1QTNF8P60827 252 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 DSC2Q02487 901 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NFE2L1Q14494 772 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 NCBP2-AS2Q69YL0 99 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ZFAND1Q8TCF1 268 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 OSTF1Q92882 214 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 HBEGFQ99075 208 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 FBXO44Q9H4M3 255 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ZNF286BP0CG31 522 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CTPS1P17812 591 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 CDKN2DP55273 166 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 RAPSNQ13702 412 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 LRRC26Q2I0M4 334 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 RPL3LQ92901 407 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 AKT1S1Q96B36 256 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 AGO1Q9UL18 857 aaKnown RBP7.67□□□□□ -1.18
SMG1-202ENST00000446231 TLR6Q9Y2C9 796 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SPATA31A1Q5TZJ5 1347 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 ALPLP05186 524 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 COL28A1Q2UY09 1125 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 C9orf57Q5W0N0 161 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 FAM180AQ6UWF9 173 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 SLC51BQ86UW2 128 aa7.67□□□□□ -1.18
SMG1-202ENST00000446231 WASHC1A8K0Z3 465 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TRIM3O75382 744 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 MAFO75444 373 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 MLLT3P42568 568 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 P2RX3P56373 397 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 GRIK2Q13002 908 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 FGFBP1Q14512 234 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 BCL2L15Q5TBC7 163 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 GDPD3Q7L5L3 318 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ATAD1Q8NBU5 361 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 LRCH3Q96II8 777 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MAP6Q96JE9 813 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MYOCQ99972 504 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 HOXD1Q9GZZ0 328 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 UPB1Q9UBR1 384 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 IGLV3-22A0A075B6J6 115 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CDK14O94921 469 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 SPNP16150 400 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PBX3P40426 434 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 HSPA7P48741 367 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 SLC22A10Q63ZE4 541 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 LRRN1Q6UXK5 716 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CERS6Q6ZMG9 384 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ZNF782Q6ZMW2 699 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 CEACAM19Q7Z692 300 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 EMC7Q9NPA0 242 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CD300AQ9UGN4 299 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PRPS1L1P21108 318 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 RBM34P42696 430 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 PHACTR4Q8IZ21 702 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 SYNPOQ8N3V7 929 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 KAT2AQ92830 837 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TCEAL3Q969E4 200 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CD1DP15813 335 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CASP9P55211 416 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PTPRJQ12913 1337 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 NANSQ9NR45 359 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TIMM13Q9Y5L4 95 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 ZCCHC11Q5TAX3 1644 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 MOXD2PA6NHM9 499 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CDC7O00311 574 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 OR4F21O95013 312 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MT-CYBP00156 380 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 GABRB3P28472 473 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 FCGRTP55899 365 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MPP7Q5T2T1 576 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 OR7G3Q8NG95 312 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.66□□□□□ -1.187e-7■■■■□ 20.9
SMG1-202ENST00000446231 KLHL5Q96PQ7 755 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 FCRL5Q96RD9 977 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MGAT4CQ9UBM8 478 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CASZ1Q86V15 1759 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CLDN24A6NM45 220 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 LRRN3E7EW58 273 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TOXO94900 526 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 HLA-DQB2P05538 268 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 H2AFB2P0C5Z0 115 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms