RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 MLXIPLQ9NP71 852 aa12.66□□□□□ -0.38
TIMP1-204ENST00000445623 SLC6A20Q9NP91 592 aa12.66□□□□□ -0.38
TIMP1-204ENST00000445623 SEMA4BQ9NPR2 832 aaPredicted RBP12.66□□□□□ -0.38
TIMP1-204ENST00000445623 INTS9Q9NV88 658 aaKnown RBP12.66□□□□□ -0.38
TIMP1-204ENST00000445623 CUEDC1Q9NWM3 386 aaPredicted RBP12.66□□□□□ -0.38
TIMP1-204ENST00000445623 HEATR5BQ9P2D3 2071 aa12.66□□□□□ -0.38
TIMP1-204ENST00000445623 OR2A25A4D2G3 310 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 H7BY64 318 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 NPHS1O60500 1241 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 SNUPNO95149 360 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 SERPINE1P05121 402 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 EBLN1P0CF75 366 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 JUPP14923 745 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 CHN1P15882 459 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 NELFEP18615 380 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 GRK2P25098 689 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 RPS15AP62244 130 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 ACY1Q03154 408 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 RELAQ04206 551 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 PCDH1Q08174 1060 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 CHIT1Q13231 466 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 EIF3IQ13347 325 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 CHI3L2Q15782 390 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 TBCCQ15814 346 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 CATSPEREQ5SY80 951 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 LIPJQ5W064 366 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 ZNF425Q6IV72 752 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 PAQR7Q86WK9 346 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 MYLK4Q86YV6 388 aaPredicted RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 HOMEZQ8IX15 550 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 DCBLD1Q8N8Z6 715 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 RCBTB1Q8NDN9 531 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 RAB3IL1Q8TBN0 382 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 TRPC4APQ8TEL6 797 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 UBE2E3Q969T4 207 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 LIN37Q96GY3 246 aaPredicted RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 PRAP1Q96NZ9 151 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 NSUN5Q96P11 429 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 ZNF382Q96SR6 550 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 KLHL25Q9H0H3 589 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 GSTO2Q9H4Y5 243 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 EML4Q9HC35 981 aaKnown RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
TIMP1-204ENST00000445623 COL27A1Q8IZC6 1860 aaPredicted RBP12.65□□□□□ -0.38
TIMP1-204ENST00000445623 CCDC187A0A096LP49 1063 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 TMEM114B3SHH9 223 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 CLDN9O95484 217 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 FGF3P11487 239 aaPredicted RBP12.64□□□□□ -0.39
TIMP1-204ENST00000445623 EPORP19235 508 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 GSTM2P28161 218 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 HNF4AP41235 474 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 CASP2P42575 452 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 PDX1P52945 283 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 CDH13P55290 713 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 PKNOX1P55347 436 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 CSNK1G2P78368 415 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 REEP5Q00765 189 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 RCN2Q14257 317 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 SLBPQ14493 270 aaKnown RBP eCLIP12.64□□□□□ -0.39
TIMP1-204ENST00000445623 ATG16L1Q676U5 607 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 FCRL6Q6DN72 434 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 SLCO4C1Q6ZQN7 724 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 GPRIN3Q6ZVF9 776 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 RNF44Q7L0R7 432 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 MILR1Q7Z6M3 343 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 B3GNT8Q7Z7M8 397 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 D2HGDHQ8N465 521 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 TTLQ8NG68 377 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 OR4K1Q8NGD4 311 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 FAM76AQ8TAV0 307 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 MDM1Q8TC05 714 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 REPS1Q96D71 796 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 WDR34Q96EX3 536 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 ZFYVE21Q9BQ24 234 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 PLCL2Q9UPR0 1127 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 KLHL20Q9Y2M5 609 aa12.64□□□□□ -0.39
TIMP1-204ENST00000445623 CNOT1A5YKK6 2376 aaKnown RBP12.63□□□□□ -0.39
TIMP1-204ENST00000445623 TRBC2A0A5B9 178 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 OR7A17O14581 309 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 HAT1O14929 419 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 CRCPO75575 148 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 WFS1O76024 890 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
TIMP1-204ENST00000445623 MSL3P1P0C860 447 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 BGNP21810 368 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 VARSP26640 1264 aaKnown RBP12.63□□□□□ -0.39
TIMP1-204ENST00000445623 SERPINB1P30740 379 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 ID4P47928 161 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 YBX1P67809 324 aaKnown RBP12.63□□□□□ -0.39
TIMP1-204ENST00000445623 PHEXP78562 749 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 GALNT1Q10472 559 aaPredicted RBP12.63□□□□□ -0.39
TIMP1-204ENST00000445623 TRAF3Q13114 568 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 STX3Q13277 289 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 DOC2AQ14183 400 aa12.63□□□□□ -0.39
TIMP1-204ENST00000445623 E2F2Q14209 437 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms