RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 ANKDD1BA6NHY2 528 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 M0QX08 132 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 WNT9AO14904 365 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 URODP06132 367 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 PRR35P0CG20 571 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 GRK3P35626 688 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 MAGEA8P43361 318 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 VLDLRP98155 873 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 SRSF11Q05519 484 aaKnown RBP11.51□□□□□ -0.57
MSH6-204ENST00000445503 HIST2H2ACQ16777 129 aaPredicted RBP11.51□□□□□ -0.57
MSH6-204ENST00000445503 ARMCX4Q5H9R4 360 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 IRAK1BP1Q5VVH5 260 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 HIST2H2AA3Q6FI13 130 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 TMEM53Q6P2H8 277 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 TTC23LQ6PF05 361 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 LGI4Q8N135 537 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 DMRTB1Q96MA1 342 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 FEVQ99581 238 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 HTATIP2Q9BUP3 242 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 PDFQ9HBH1 243 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 C11orf16Q9NQ32 467 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 ZDHHC3Q9NYG2 299 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 DYRK1BQ9Y463 629 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 SERPINB7O75635 380 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 GALTP07902 379 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 RETP07949 1114 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 GADD45AP24522 165 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 PREPP48147 710 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 DAPP51397 102 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 CDC42P60953 191 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 COPZ1P61923 177 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 C2orf80Q0P641 193 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 ACOX1Q15067 660 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 DEPDC1Q5TB30 811 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 CPZQ66K79 652 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 TRAPPC5Q8IUR0 188 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 Q96MT0 163 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 CNPPD1Q9BV87 410 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 DSN1Q9H410 356 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 CLMPQ9H6B4 373 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 THG1LQ9NWX6 298 aaKnown RBP11.51□□□□□ -0.57
MSH6-204ENST00000445503 TRPC4Q9UBN4 977 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 MOSPD1Q9UJG1 213 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 SMIM30A4D0T7 59 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 TGFB1P01137 390 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 C9P02748 559 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 LRG1P02750 347 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 GSTM1P09488 218 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 SMARCB1Q12824 385 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 RGMBQ6NW40 437 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 SHQ1Q6PI26 577 aaKnown RBP11.51□□□□□ -0.57
MSH6-204ENST00000445503 EIF3MQ7L2H7 374 aaKnown RBP11.51□□□□□ -0.57
MSH6-204ENST00000445503 CACUL1Q86Y37 369 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 GPR65Q8IYL9 337 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 LMNTD1Q8N9Z9 388 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 ADAMTS16Q8TE57 1224 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 UBASH3BQ8TF42 649 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 TANKQ92844 425 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 SLC29A3Q9BZD2 475 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 TRIT1Q9H3H1 467 aaKnown RBP11.51□□□□□ -0.57
MSH6-204ENST00000445503 VNN3Q9NY84 501 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 GPR83Q9NYM4 423 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 PCDHGB3Q9Y5G1 929 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
MSH6-204ENST00000445503 A8MV72 311 aaPredicted RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 UPK1AO00322 258 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 ADAM23O75077 832 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 MGAT3Q09327 533 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 SERPINA13PQ6UXR4 307 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 GPR26Q8NDV2 337 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 C14orf119Q9NWQ9 140 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 SLC13A4Q9UKG4 626 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 ACSL6Q9UKU0 697 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 YIPF1Q9Y548 306 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 PARP14Q460N5 1801 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 KPNA3O00505 521 aaPredicted RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 OR10H3O60404 316 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 TPST2O60704 377 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 RPLP0P05388 317 aaKnown RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 JUNBP17275 347 aaPredicted RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 KRT20P35900 424 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 IL18R1Q13478 541 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 TYW3Q6IPR3 259 aaKnown RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 ZNF366Q8N895 744 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 ASZ1Q8WWH4 475 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 CMTM7Q96FZ5 175 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 MRPL9Q9BYD2 267 aaKnown RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 KLHL3Q9UH77 587 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 KCNE2Q9Y6J6 123 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 WISP3O95389 354 aaPredicted RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 PRKAG1P54619 331 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 EIF4EBP2Q13542 120 aaPredicted RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 BTG3Q14201 252 aaPredicted RBP11.5□□□□□ -0.57
MSH6-204ENST00000445503 GPR33Q49SQ1 333 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 GPRC6AQ5T6X5 926 aa11.5□□□□□ -0.57
MSH6-204ENST00000445503 DEF8Q6ZN54 512 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms