RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 PALM2Q8IXS6 379 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 C17orf53Q8N3J3 647 aaPredicted RBP13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 ARHGEF39Q8N4T4 335 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 CSNK1A1LQ8N752 337 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 SMAD5Q99717 465 aaKnown RBP13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 OLFM1Q99784 485 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 ERP44Q9BS26 406 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 ZNF304Q9HCX3 659 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 ABCF3Q9NUQ8 709 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 GPR83Q9NYM4 423 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 WHRNQ9P202 907 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 ZFATQ9P243 1243 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 RUVBL1Q9Y265 456 aaKnown RBP13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 ZNF451Q9Y4E5 1061 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 PSAT1Q9Y617 370 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 MAU2Q9Y6X3 613 aa13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
AP001062.3-202ENST00000444409 IGLV3-12A0A075B6K2 115 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 A6NL46 340 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 H7BY64 318 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HAT1O14929 419 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 RAD51CO43502 376 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HIST1H2AGP0C0S8 130 aaPredicted RBP13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HIST1H2ADP20671 130 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 CASQ1P31415 396 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 PGGT1BP53609 377 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 SOX8P57073 446 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 PRAMEF13Q5VWM6 474 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 AGTRAPQ6RW13 159 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 MAATS1Q7Z4T9 603 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 ADCK2Q7Z695 626 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 SLC26A11Q86WA9 606 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 ZC3HC1Q86WB0 502 aaKnown RBP13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HPS6Q86YV9 775 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 ZBED8Q8IZ13 594 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 GALNT16Q8N428 558 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 RERGQ96A58 199 aaPredicted RBP13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 COL26A1Q96A83 441 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 PDLIM5Q96HC4 596 aaKnown RBP13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 CABS1Q96KC9 395 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HIST1H2AHQ96KK5 128 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HIST1H2AJQ99878 128 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 H2AFJQ9BTM1 129 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 SGPP1Q9BX95 441 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 SOX17Q9H6I2 414 aaPredicted RBP13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 TMEM184CQ9NVA4 438 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 ZNF282Q9UDV7 671 aaPredicted RBP13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 CDC23Q9UJX2 597 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 HS3ST3B1Q9Y662 390 aa13.02□□□□□ -0.33
AP001062.3-202ENST00000444409 KCNE1BA0A087WTH5 132 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 TXNDC9O14530 226 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 SOCS6O14544 535 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 P2RX6O15547 441 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 DPM1O60762 260 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 ZNF37AP17032 561 aaPredicted RBP13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 CCND1P24385 295 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 AP1S2P56377 157 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 OCA2Q04671 838 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 C2orf54Q08AI8 447 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 CALCOCO2Q13137 446 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 NAE1Q13564 534 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 DSG2Q14126 1118 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 MYBPC3Q14896 1274 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 IGFBP7Q16270 282 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 ZXDCQ2QGD7 858 aaPredicted RBP13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 NADK2Q4G0N4 442 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 VWA5B1Q5TIE3 1220 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 DUPD1Q68J44 220 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 SYT10Q6XYQ8 523 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 SHISA6Q6ZSJ9 500 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 STRA8Q7Z7C7 330 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 PLD3Q8IV08 490 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 STT3BQ8TCJ2 826 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 ATG10Q9H0Y0 220 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 DPH5Q9H2P9 285 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 SEMA3GQ9NS98 782 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 GRHL1Q9NZI5 618 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 C5AR2Q9P296 337 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 CDC14AQ9UNH5 594 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 SH2B3Q9UQQ2 575 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 COL12A1Q99715 3063 aa13.01□□□□□ -0.33
AP001062.3-202ENST00000444409 NUP210LQ5VU65 1888 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 FAM95CA0A1B0GW59 222 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 MASP2O00187 686 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 EIF3HO15372 352 aaKnown RBP eCLIP13□□□□□ -0.33
AP001062.3-202ENST00000444409 PRPF4O43172 522 aaKnown RBP eCLIP13□□□□□ -0.33
AP001062.3-202ENST00000444409 FOXS1O43638 330 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 SORBS2O94875 1100 aaKnown RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 ENO2P09104 434 aaPredicted RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 ZGLP1P0C6A0 271 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 FBLP22087 321 aaKnown RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 SLC26A3P40879 764 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms