RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RBBP7Q16576 425 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 KIF26BQ2KJY2 2108 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 SGSM1Q2NKQ1 1148 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 SLC25A47Q6Q0C1 308 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 GSG1LQ6UXU4 331 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 SPATA19Q7Z5L4 167 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 HOGA1Q86XE5 327 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 DCLK2Q8N568 766 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 SPATA3Q8NHX4 192 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 DEPDC1BQ8WUY9 529 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 APOBEC4Q8WW27 367 aaKnown RBP4.29□□□□□ -1.72
PFDN4-202ENST00000441080 METTL21AQ8WXB1 218 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 INTS14Q96SY0 518 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 LPAR4Q99677 370 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 SDCBP2Q9H190 292 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 MAN2C1Q9NTJ4 1040 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 PLCXD1Q9NUJ7 323 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 PKD2L2Q9NZM6 624 aa4.29□□□□□ -1.72
PFDN4-202ENST00000441080 IGSF1Q8N6C5 1336 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 SNURFLB1AK76 121 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 ZNF821O75541 412 aaPredicted RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 RPN1P04843 607 aaKnown RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 ALDH1B1P30837 517 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 LEPRP48357 1165 aaKnown RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 PAX9P55771 341 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 SCN1BQ07699 218 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 TRIM29Q14134 588 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 OPCMLQ14982 345 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 ZNF74Q16587 644 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 SUSD4Q5VX71 490 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 PTAR1Q7Z6K3 402 aaPredicted RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 CCDC63Q8NA47 563 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 SMAP2Q8WU79 429 aaPredicted RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 PIK3R3Q92569 461 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 P2RX5Q93086 422 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 ST6GALNAC6Q969X2 333 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 FAM162AQ96A26 154 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 AZIN2Q96A70 460 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 NECTIN4Q96NY8 510 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 NKX3-1Q99801 234 aaPredicted RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 CITED2Q99967 270 aaPredicted RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 PIGQQ9BRB3 760 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 CLEC7AQ9BXN2 247 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 TMEM181Q9P2C4 612 aa4.28□□□□□ -1.72
PFDN4-202ENST00000441080 KLHL8Q9P2G9 620 aaPredicted RBP4.28□□□□□ -1.72
PFDN4-202ENST00000441080 F8VVB4 439 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 F8VWA3 439 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 TEX28O15482 410 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 KRT33AO76009 404 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 SIX3O95343 332 aaPredicted RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 VTNP04004 478 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 ZFYP08048 801 aaPredicted RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 PRKAR1AP10644 381 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 SFTPDP35247 375 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 SLC6A12P48065 614 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 GMPSP49915 693 aaPredicted RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 PTENP60484 403 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 BFSP1Q12934 665 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 TAZQ16635 292 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 TMEM182Q6ZP80 229 aaPredicted RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 KRT77Q7Z794 578 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 DZIP1Q86YF9 867 aaKnown RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 RCOR2Q8IZ40 523 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 OR2T6Q8NHC8 308 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 SLC26A7Q8TE54 656 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 GATAD1Q8WUU5 269 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 EXOC4Q96A65 974 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 ERO1AQ96HE7 468 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 KLHL5Q96PQ7 755 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 BTBD9Q96Q07 612 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 NDNQ99608 321 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 THUMPD3Q9BV44 507 aaKnown RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 NYXQ9GZU5 481 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 RIMS4Q9H426 269 aaPredicted RBP4.27□□□□□ -1.73
PFDN4-202ENST00000441080 RNF121Q9H920 327 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 SH3GLB2Q9NR46 395 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 RASAL2Q9UJF2 1139 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 ANGPTL3Q9Y5C1 460 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 HEG1Q9ULI3 1381 aa4.27□□□□□ -1.73
PFDN4-202ENST00000441080 A0A087WUV0 522 aaPredicted RBP4.26□□□□□ -1.73
PFDN4-202ENST00000441080 A0A1W2PRQ8 180 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 PPIP5K2O43314 1243 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 PRAF2O60831 178 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 FCGR3BO75015 233 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 SULT2A1Q06520 285 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 SCARB2Q14108 478 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 CDO1Q16878 200 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 TWISTNBQ3B726 338 aaPredicted RBP4.26□□□□□ -1.73
PFDN4-202ENST00000441080 SPOUT1Q5T280 376 aaKnown RBP4.26□□□□□ -1.73
PFDN4-202ENST00000441080 MPP7Q5T2T1 576 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 TXNRD3NBQ6F5E7 133 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 NOTUMQ6P988 496 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 LEKR1Q6ZMV7 388 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 ANKRD33Q7Z3H0 272 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 PHLDB2Q86SQ0 1253 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 APCDD1Q8J025 514 aa4.26□□□□□ -1.73
PFDN4-202ENST00000441080 LRTM2Q8N967 370 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms