RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GLB1L3Q8NCI6 653 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 FLCNQ8NFG4 579 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 MTERF1Q99551 399 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 EMILIN2Q9BXX0 1053 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 TMEM39AQ9NV64 488 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 QPCTLQ9NXS2 382 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 DNAJB9Q9UBS3 223 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 MAGEL2Q9UJ55 1249 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 PCDHGA10Q9Y5H3 936 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 OTOFQ9HC10 1997 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 F5P12259 2224 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 A0A1W2PQ72 361 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 TCRBV5S2A0A599 114 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 SOX14O95416 240 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 URODP06132 367 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ALOX5P09917 674 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 HOXD10P28358 340 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 HOXC13P31276 330 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CTSOP43234 321 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CAV3P56539 151 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CBX2Q14781 532 aaPredicted RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CTSL3PQ5NE16 218 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ATAD3CQ5T2N8 411 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CACHD1Q5VU97 1274 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 OR4F3Q6IEY1 312 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 RETSATQ6NUM9 610 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 GPR65Q8IYL9 337 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ELMOD2Q8IZ81 293 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 PARP16Q8N5Y8 322 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 LILRB4Q8NHJ6 448 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 CD200R1Q8TD46 325 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 DPF3Q92784 378 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 BEX1Q9HBH7 125 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 AKIP1Q9NQ31 210 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ABCB8Q9NUT2 735 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 PCTPQ9UKL6 214 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 YIPF1Q9Y548 306 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 ALPK2Q86TB3 2170 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 PLXNB2O15031 1838 aa9.65□□□□□ -0.86
CDC42SE1-202ENST00000439374 WDR90Q96KV7 1748 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 GLYATL1P3A0A0U1RQE8 302 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 C12orf71A8MTZ7 269 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 FAM227AF5H4B4 570 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 KDELR3O43731 214 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 CREG1O75629 220 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 CHRNB1P11230 501 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 OGNP20774 298 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 IFNA8P32881 189 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 CA5AP35218 305 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACADVLP49748 655 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 EPHB3P54753 998 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 RFX4Q33E94 735 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 DGKKQ5KSL6 1271 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 GDPD3Q7L5L3 318 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 BCDIN3DQ7Z5W3 292 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 NPAS4Q8IUM7 802 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 ASCC1Q8N9N2 400 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 MRPS31Q92665 395 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 MCMBPQ9BTE3 642 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 DERL2Q9GZP9 239 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF225Q9UK10 706 aa9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 LSM7Q9UK45 103 aaKnown RBP9.65□□□□□ -0.87
CDC42SE1-202ENST00000439374 PLXNA1Q9UIW2 1896 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 PRR23AA6NEV1 266 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 EPB42P16452 691 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 MSH3P20585 1137 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 GRK5P34947 590 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 HTR7P34969 479 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 IL18R1Q13478 541 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 TSTQ16762 297 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 FAM209AQ5JX71 171 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 AGAP7PQ5VUJ5 663 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ABI3BPQ7Z7G0 1075 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 MFSD4AQ8N468 514 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 MUL1Q969V5 352 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 FKBP10Q96AY3 582 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF583Q96ND8 569 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 UHRF1Q96T88 793 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACAT2Q9BWD1 397 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 CDCP1Q9H5V8 836 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 C11orf16Q9NQ32 467 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 AIG1Q9NVV5 245 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 SH3BP4Q9P0V3 963 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 RNF6Q9Y252 685 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 EFCAB10A6NFE3 127 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 NEDD8-MDP1E9PL57 170 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 H0YJX3 145 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 SCAMP1O15126 338 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 CCL16O15467 120 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 RPIAP49247 311 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 INPP1P49441 399 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ISL1P61371 349 aa9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 TIAL1Q01085 375 aaKnown RBP eCLIP9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 ELAVL2Q12926 359 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-202ENST00000439374 RCAN2Q14206 197 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms