RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ERAP1Q9NZ08 941 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 MAN1B1Q9UKM7 699 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 ITGA11Q9UKX5 1188 aa3.27□□□□□ -1.89
TRAPPC13-204ENST00000438419 DISP3Q9P2K9 1392 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 IFIT3O14879 490 aaKnown RBP3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 ST8SIA3O43173 380 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 GLRA3O75311 464 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 RAF1P04049 648 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 VDRP11473 427 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 PSMB4P28070 264 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 ALDH4A1P30038 563 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 RGS7P49802 495 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 VAMP7P51809 220 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 HERC3Q15034 1050 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 NONOQ15233 471 aaKnown RBP eCLIP3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 TAZQ16635 292 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 MEP1BQ16820 701 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 XKR6Q5GH73 641 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 CEP85LQ5SZL2 805 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 GBP6Q6ZN66 633 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 G2E3Q7L622 706 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 NOTCH2NLQ7Z3S9 236 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 SYCP3Q8IZU3 236 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 RASGEF1AQ8N9B8 481 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 TMEM178AQ8NBL3 297 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 UXS1Q8NBZ7 420 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 HCAR2Q8TDS4 363 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 MRGPRDQ8TDS7 321 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 GRK7Q8WTQ7 553 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 RAD54LQ92698 747 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 DNASE1L2Q92874 299 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 PARK7Q99497 189 aaKnown RBP3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 MLPHQ9BV36 600 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 DNAI2Q9GZS0 605 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 ZMYND12Q9H0C1 365 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 WDR13Q9H1Z4 485 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 P2RY12Q9H244 342 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR6C2Q9NZP2 312 aa3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 C19orf25Q9UFG5 118 aaPredicted RBP3.26□□□□□ -1.89
TRAPPC13-204ENST00000438419 IGSF1Q8N6C5 1336 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 TRAV24A0A0B4J272 114 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 MEIOCA2RUB1 952 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 C5orf52A6NGY3 159 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CASTOR2A6NHX0 329 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 NR5A2O00482 541 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 EPHB6O15197 1021 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 PPIP5K2O43314 1243 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 SNX3O60493 162 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 SELENOFO60613 162 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CDK2AP2O75956 126 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 APOHP02749 345 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 STAG3L1P0CL83 205 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 SPP1P10451 314 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 GP1BBP13224 206 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CEBPBP17676 345 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CD27P26842 260 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 SOAT1P35610 550 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 GMPSP49915 693 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 SNRPD1P62314 119 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 RASGEF1BQ0VAM2 473 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ILF2Q12905 390 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 SQLEQ14534 574 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 PTGISQ16647 500 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 TWISTNBQ3B726 338 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ANKRD20A4Q4UJ75 823 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ANKRD20A8PQ5CZ79 823 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CCDC158Q5M9N0 1113 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ANKRD20A2Q5SQ80 823 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ANKRD20A1Q5TYW2 823 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 LCN1P1Q5VSP4 162 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ANKRD20A3Q5VUR7 823 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 TXNRD3NBQ6F5E7 133 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR4A47Q6IF82 309 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 IYDQ6PHW0 289 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 TUSC5Q8IXB3 177 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 RAB42Q8N4Z0 105 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 NOA1Q8NC60 698 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 MSANTD4Q8NCY6 345 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 OR5AP2Q8NGF4 316 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 FIBINQ8TAL6 211 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 UBE2Q2Q8WVN8 375 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 GMPPAQ96IJ6 420 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CCDC3Q9BQI4 270 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 UTP14AQ9BVJ6 771 aaKnown RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 FUT8Q9BYC5 575 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 FAM49AQ9H0Q0 323 aaPredicted RBP3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 TLE6Q9H808 572 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 FGF22Q9HCT0 170 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 RAB9BQ9NP90 201 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 GSN-AS1Q9NRJ2 163 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 ATAD3AQ9NVI7 634 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 CDH7Q9ULB5 785 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 TNNQ9UQP3 1299 aa3.25□□□□□ -1.89
TRAPPC13-204ENST00000438419 FMO6PO60774 539 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 PRAF2O60831 178 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 FCGR3BO75015 233 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 KHDRBS3O75525 346 aaKnown RBP3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 ATP6AP2O75787 350 aa3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 NKX2-1P43699 371 aaPredicted RBP3.24□□□□□ -1.89
TRAPPC13-204ENST00000438419 MFAP3P55082 362 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms