RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CSF3P09919 207 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 UROSP10746 265 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 APEX1P27695 318 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CD86P42081 329 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 GEMP55040 296 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 KEAP1Q14145 624 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 KDM4DQ6B0I6 523 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ANKRD54Q6NXT1 300 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CHPFQ8IZ52 775 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SLC34A3Q8N130 599 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 OR6J1Q8NGC5 347 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 OR9Q1Q8NGQ5 310 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 C1orf109Q9NX04 203 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 THUMPD1Q9NXG2 353 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF222Q9UK12 451 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 V9GYH0 126 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 FABP7O15540 132 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CDK1P06493 297 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ALAS2P22557 587 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CAV3P56539 151 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ERVPABLB-1P60509 514 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MFSD13AQ14CX5 517 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 TBCEQ15813 527 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 PIK3R6Q5UE93 754 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SAXO2Q658L1 398 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 PDE12Q6L8Q7 609 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 CHMP1BQ7LBR1 199 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MSRB3Q8IXL7 192 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 EFHBQ8N7U6 833 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 RTL3Q8N8U3 475 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF680Q8NEM1 530 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 SETD6Q8TBK2 473 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 PSORS1C1Q9UIG5 152 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 DUSP12Q9UNI6 340 aa7.25□□□□□ -1.25
CPSF6-202ENST00000435070 MRPS7Q9Y2R9 242 aaKnown RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 PRG3Q9Y2Y8 225 aaPredicted RBP7.25□□□□□ -1.25
CPSF6-202ENST00000435070 C1QBP02746 253 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 HMBSP08397 361 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 KCNQ1P51787 676 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MBTD1Q05BQ5 628 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 LETMD1Q6P1Q0 360 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 BRAT1Q6PJG6 821 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 KDELC1Q6UW63 502 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 NUDT18Q6ZVK8 323 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 C19orf18Q8NEA5 215 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 LHFPL5Q8TAF8 219 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 STAG3L4Q8TBR4 150 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SENP8Q96LD8 212 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 BRINP2Q9C0B6 783 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ASB7Q9H672 318 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SLAMF7Q9NQ25 335 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 RDH8Q9NYR8 311 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 PRKAB1Q9Y478 270 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 PCDHGA6Q9Y5G7 932 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CLCA1A8K7I4 914 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CDRT1O95170 752 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 TNFRSF1BP20333 461 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 RPA4Q13156 261 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MAB21L1Q13394 359 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 FAM171BQ6P995 826 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ADCK2Q7Z695 626 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 DNAJC22Q8N4W6 341 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 DPP10Q8N608 796 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ATP6V1C2Q8NEY4 427 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 RACGAP1Q9H0H5 632 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CRISPLD1Q9H336 500 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MS4A12Q9NXJ0 267 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 RGS17Q9UGC6 210 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MIA3Q5JRA6 1907 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 A0A1W2PQL4 384 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 PLA2G10O15496 165 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SLC2A3P11169 496 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 DSTNP60981 165 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ABATP80404 500 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 C2orf80Q0P641 193 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 DOC2BQ14184 412 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 TTLL4Q14679 1199 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SNAPC1Q16533 368 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 IGSF11Q5DX21 431 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 OR13C4Q8NGS5 318 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF431Q8TF32 576 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 COL21A1Q96P44 957 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SORBS1Q9BX66 1292 aaKnown RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SAV1Q9H4B6 383 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 WASH6PQ9NQA3 447 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SLC35C2Q9NQQ7 365 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 COMMD3Q9UBI1 195 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MGAT4AQ9UM21 535 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 PRR23AA6NEV1 266 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 KCNJ13O60928 360 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 B3GALNT1O75752 331 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MMP10P09238 476 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 MAP2K6P52564 334 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 TOR1AIP1Q5JTV8 583 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ZBTB37Q5TC79 503 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 KIAA0319Q5VV43 1072 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 TRIQKQ629K1 86 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 QRFPRQ96P65 431 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms