RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 GSNP06396 782 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 GPIP06744 558 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 SLC35G4P0C7Q5 338 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 GPR89BP0CG08 455 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 CDH1P12830 882 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 HOXB9P17482 250 aaPredicted RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 PRPS1L1P21108 318 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 CDKN2CP42773 168 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 CLCNKAP51800 687 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PPP2CBP62714 309 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PPP2CAP67775 309 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 LRIF1Q5T3J3 769 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 IER5LQ5T953 404 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 GLYATQ6IB77 296 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 FAM124AQ86V42 546 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 GPR180Q86V85 440 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 HORMAD1Q86X24 394 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PROSER1Q86XN7 944 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 LAS2Q8IYD9 372 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 OR10A6Q8NH74 314 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 AURKBQ96GD4 344 aaPredicted RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 OSGEPL1Q9H4B0 414 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 EHD1Q9H4M9 534 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 RMND5AQ9H871 391 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 BATF3Q9NR55 127 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PCDHB14Q9Y5E9 798 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 V9GYQ6 96 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 HEATR5BQ9P2D3 2071 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3DA0A087WVF3 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3IA0A087WXS9 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3EA0A087X179 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3KA0A087X1G2 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3FA6NER0 549 aaPredicted RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3LB9A6J9 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 ERN1O75460 977 aaKnown RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3HP0C7X1 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PCSK2P16519 638 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 IL10P22301 178 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 FOLH1Q04609 750 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 MTAPQ13126 283 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PAGE2BQ5JRK9 111 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3GQ6DHY5 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3CQ6IPX1 549 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 LCTLQ6UWM7 567 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 PHACTR4Q8IZ21 702 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 TBC1D3Q8IZP1 549 aaPredicted RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 OR2T12Q8NG77 320 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 CHTF18Q8WVB6 975 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 NELL1Q92832 810 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 GATA6Q92908 595 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 BIRC7Q96CA5 298 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 NR1H4Q96RI1 486 aaPredicted RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 CPPED1Q9BRF8 314 aaPredicted RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 ACAT2Q9BWD1 397 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 REXO4Q9GZR2 422 aaKnown RBP18.86■□□□□ 0.61
VRK2-205ENST00000432057 DMRT3Q9NQL9 472 aa18.86■□□□□ 0.61
VRK2-205ENST00000432057 MYO10Q9HD67 2058 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 C2CD4DB7Z1M9 353 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 H3BQ06 376 aaPredicted RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 HNRNPRO43390 633 aaKnown RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 PRMT3O60678 531 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 RPN2P04844 631 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 CEACAM5P06731 702 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 ERGP11308 486 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 GGT1P19440 569 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 PTPN6P29350 595 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 KIR3DL1P43629 444 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 MRPS35P82673 323 aaKnown RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 SPIN4Q56A73 249 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 ZNF740Q8NDX6 193 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 ZNF548Q8NEK5 533 aaPredicted RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 DNAJB8Q8NHS0 232 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 SETD7Q8WTS6 366 aaKnown RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 METTL2AQ96IZ6 378 aaKnown RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 NSMCE2Q96MF7 247 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 TRIT1Q9H3H1 467 aaKnown RBP18.85■□□□□ 0.61
VRK2-205ENST00000432057 COQ10BQ9H8M1 238 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 CD93Q9NPY3 652 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 ANAPC2Q9UJX6 822 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 KCNK6Q9Y257 313 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 WDR37Q9Y2I8 494 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 PLEKHM1Q9Y4G2 1056 aa18.85■□□□□ 0.61
VRK2-205ENST00000432057 SLC31A1O15431 190 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 ANXA4P09525 319 aaPredicted RBP18.84■□□□□ 0.61
VRK2-205ENST00000432057 COX7A2P14406 83 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 ZNF26P17031 533 aaPredicted RBP18.84■□□□□ 0.61
VRK2-205ENST00000432057 TIA1P31483 386 aaKnown RBP eCLIP18.84■□□□□ 0.615e-6■■■■□ 20.5
VRK2-205ENST00000432057 DMPKQ09013 629 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 MED21Q13503 144 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 HIST2H2ACQ16777 129 aaPredicted RBP18.84■□□□□ 0.61
VRK2-205ENST00000432057 DPY19L1Q2PZI1 675 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 HIST2H2AA3Q6FI13 130 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 ANKRD26P1Q6NSI1 321 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 TMEM154Q6P9G4 183 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 MSANTD1Q6ZTZ1 278 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 TMEM132CQ8N3T6 1108 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 SIPA1Q96FS4 1042 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 CIB1Q99828 191 aa18.84■□□□□ 0.61
VRK2-205ENST00000432057 C1QTNF7Q9BXJ2 289 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms