RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PLA2G2FQ9BZM2 168 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 OXSMQ9NWU1 459 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 C1orf109Q9NX04 203 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 CA5BQ9Y2D0 317 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PCDHGA2Q9Y5H1 932 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 FAM25EA8MYX2 175 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 NARSO43776 548 aaKnown RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 C1SP09871 688 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 IDH2P48735 452 aaKnown RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 LRIT3Q3SXY7 679 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 STEAP4Q687X5 459 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 TIFABQ6ZNK6 161 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 CLVS1Q8IUQ0 354 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 NEK7Q8TDX7 302 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 BOCQ9BWV1 1114 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SPATA7Q9P0W8 599 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 EFCAB10A6NFE3 127 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 LATO43561 262 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 SCN2BO60939 215 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 AFF3P51826 1226 aaKnown RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PRSS36Q5K4E3 855 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 OTUD1Q5VV17 481 aaPredicted RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 CDC73Q6P1J9 531 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 GFM1Q96RP9 751 aaKnown RBP12.54□□□□□ -0.4
PTCH1-207ENST00000429896 CD244Q9BZW8 370 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 EQTNQ9NQ60 294 aa12.54□□□□□ -0.4
PTCH1-207ENST00000429896 CCDC189A1A4V9 331 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 CDH1P12830 882 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 MNX1P50219 401 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 ZNF140P52738 457 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 TAS2R50P59544 299 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 BTN3A2P78410 334 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 KLHL12Q53G59 568 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 LACTB2Q53H82 288 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 IL23RQ5VWK5 629 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 GCNT7Q6ZNI0 430 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 DNAJB14Q8TBM8 379 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 OMA1Q96E52 524 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 FRMD6Q96NE9 622 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 CDK15Q96Q40 435 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 CCDC28BQ9BUN5 200 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PAIP1Q9H074 479 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SAP18O00422 153 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 ZBTB11O95625 1053 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 CYP4B1P13584 511 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PCSK2P16519 638 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PPIBP23284 216 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 RXRGP48443 463 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 MRPS22P82650 360 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 TGFBIQ15582 683 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 HPS6Q86YV9 775 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 TBC1D21Q8IYX1 336 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SLC13A3Q8WWT9 602 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SLC29A3Q9BZD2 475 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 GTPBP1O00178 669 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PIP5K1BO14986 540 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 UNC5CO95185 931 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PRPS2P11908 318 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 RBMS1P29558 406 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 TAZQ16635 292 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 TMEM52BQ4KMG9 183 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 JSRP1Q96MG2 331 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 OARD1Q9Y530 152 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 RBM7Q9Y580 266 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SMCHD1A6NHR9 2005 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 GABBR2O75899 941 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PTX3P26022 381 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 ABATP80404 500 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 LIX1Q8N485 282 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 EDF1O60869 148 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SLC25A12O75746 678 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SIX3O95343 332 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 EIF2B2P49770 351 aaKnown RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 BPIFB6Q8NFQ5 453 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 PIH1D2Q8WWB5 315 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 AK5Q9Y6K8 562 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 UBXN7O94888 489 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 MFN2O95140 757 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 IL6P05231 212 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 FDXRP22570 491 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 KIR3DL1P43629 444 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 MLIPQ5VWP3 458 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 USP53Q70EK8 1073 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 SPRED2Q7Z698 418 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 ENKURQ8TC29 256 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-207ENST00000429896 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
PTCH1-207ENST00000429896 AURKAO14965 403 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 YKT6O15498 198 aa12.52□□□□□ -0.4
PTCH1-207ENST00000429896 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms