RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OR10A6Q8NH74 314 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 SNIP1Q8TAD8 396 aaKnown RBP8.72□□□□□ -1.01
CTNND1-208ENST00000428599 AUTS2Q8WXX7 1259 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 KLHDC7BQ96G42 594 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 ZFP3Q96NJ6 502 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 TBX5Q99593 518 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 POLR2J3Q9H1A7 115 aaKnown RBP8.72□□□□□ -1.01
CTNND1-208ENST00000428599 UNC93B1Q9H1C4 597 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 TIGARQ9NQ88 270 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 TLR9Q9NR96 1032 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 ASB6Q9NWX5 421 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 CNTN3Q9P232 1028 aa8.72□□□□□ -1.01
CTNND1-208ENST00000428599 REXO2Q9Y3B8 237 aaKnown RBP8.72□□□□□ -1.01
CTNND1-208ENST00000428599 SNAI1O95863 264 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 MAGEA12P43365 314 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 GJA8P48165 433 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SEPHS1P49903 392 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 CLCNKAP51800 687 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 MAZP56270 477 aaKnown RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 CTBP2P56545 445 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 GBE1Q04446 702 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 HYAL2Q12891 473 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 MPP2Q14168 576 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 KCTD19Q17RG1 926 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 C1orf94Q6P1W5 598 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 P2RY8Q86VZ1 359 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 PGAM4Q8N0Y7 254 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 PLD5Q8N7P1 536 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF709Q8N972 641 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 OR52E4Q8NGH9 312 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SLC22A8Q8TCC7 542 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 TOP1MTQ969P6 601 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ACTL8Q9H568 366 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 HHATLQ9HCP6 504 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ERVK-5Q9HDB9 667 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 RNF186Q9NXI6 227 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SLC17A7Q9P2U7 560 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 FBXW11Q9UKB1 542 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 TLR6Q9Y2C9 796 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 A0A1W2PPM1 405 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ZSCAN5BA6NJL1 495 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SRRM3A6NNA2 597 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 M0R2N6 131 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 VNN1O95497 513 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 RPLP0P05388 317 aaKnown RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 CSN2P05814 226 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 PFKMP08237 780 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF35P13682 527 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 NELFEP18615 380 aaKnown RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ATF6P18850 670 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 FASTKD3Q14CZ7 662 aaKnown RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 DCBLD1Q8N8Z6 715 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 OR2L2Q8NH16 312 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 BPIFB1Q8TDL5 484 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SLC13A3Q8WWT9 602 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ARMC5Q96C12 935 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF599Q96NL3 588 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 RNF39Q9H2S5 420 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SPATA6Q9NWH7 488 aaPredicted RBP8.71□□□□□ -1.01
CTNND1-208ENST00000428599 PADI2Q9Y2J8 665 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 SNX10Q9Y5X0 201 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 TLL2Q9Y6L7 1015 aa8.71□□□□□ -1.01
CTNND1-208ENST00000428599 S100A2P29034 98 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 NRIP1P48552 1158 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 DSTNP60981 165 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 SLC35G1Q2M3R5 365 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 SOWAHAQ2M3V2 549 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 TRABD2AQ86V40 505 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 FUKQ8N0W3 1084 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 PYROXD2Q8N2H3 581 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 JAGN1Q8N5M9 183 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF296Q8WUU4 475 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-208ENST00000428599 SMPDL3AQ92484 453 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 RBP7Q96R05 134 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 CYP2S1Q96SQ9 504 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 WDR77Q9BQA1 342 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-208ENST00000428599 GRHPRQ9UBQ7 328 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 FZD10Q9ULW2 581 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 YIPF1Q9Y548 306 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 PLD2O14939 933 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 PIP5K1BO14986 540 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 HOXB9P17482 250 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-208ENST00000428599 PRDX6P30041 224 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
CTNND1-208ENST00000428599 XKP51811 444 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 SLC10A7Q0GE19 358 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 GRIK2Q13002 908 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 CRB2Q5IJ48 1285 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 DEFB119Q8N690 84 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 PHOSPHO1Q8TCT1 267 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 ZDHHC12Q96GR4 267 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 CENPNQ96H22 339 aaPredicted RBP8.71□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF285Q96NJ3 590 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 MTERF1Q99551 399 aaKnown RBP8.71□□□□□ -1.02
CTNND1-208ENST00000428599 YIPF4Q9BSR8 244 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 COPS4Q9BT78 406 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 ANKRA2Q9H9E1 313 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF224Q9NZL3 707 aa8.71□□□□□ -1.02
CTNND1-208ENST00000428599 UTS2RQ9UKP6 389 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms