RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 DPY30Q9C005 99 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 CD320Q9NPF0 282 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 CROTQ9UKG9 612 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 SDC1P18827 310 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 XRCC1P18887 633 aaPredicted RBP16.72■□□□□ 0.27
FN1-208ENST00000426059 CCND1P24385 295 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 RAB28P51157 221 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 EIF2B5Q13144 721 aaKnown RBP16.72■□□□□ 0.27
FN1-208ENST00000426059 C1orf61Q13536 156 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 RBBP5Q15291 538 aaKnown RBP16.72■□□□□ 0.27
FN1-208ENST00000426059 NOXRED1Q6NXP6 359 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 PLD3Q8IV08 490 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 PCYOX1LQ8NBM8 494 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 EFCAB11Q9BUY7 163 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 OR51B5Q9H339 312 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 CACNA1IQ9P0X4 2223 aa16.72■□□□□ 0.27
FN1-208ENST00000426059 BBIP1A8MTZ0 92 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 CSTF3Q12996 717 aaKnown RBP16.71■□□□□ 0.27
FN1-208ENST00000426059 FZD2Q14332 565 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 TLR1Q15399 786 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 ZNF423Q2M1K9 1284 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 FAM174BQ3ZCQ3 159 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 ABRAXAS1Q6UWZ7 409 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 SPEM1Q8N4L4 309 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 OR4E2Q8NGC2 313 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 CDC26Q8NHZ8 85 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 WDR34Q96EX3 536 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 HAUS8Q9BT25 410 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 CHRDQ9H2X0 955 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 SPHK1Q9NYA1 384 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 SPATA7Q9P0W8 599 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 PRPF19Q9UMS4 504 aaKnown RBP16.71■□□□□ 0.27
FN1-208ENST00000426059 DMTF1Q9Y222 760 aa16.71■□□□□ 0.27
FN1-208ENST00000426059 SPTY2D1-AS1A0A0U1RR47 76 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 C19orf67A6NJJ6 358 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 FXYD1O00168 92 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 GBAP04062 536 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 JAK1P23458 1154 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 PRPH2P23942 346 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 SLC19A1P41440 591 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 SLC7A2P52569 658 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 CYP4F2P78329 520 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 MS4A2Q01362 244 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 NFYCQ13952 458 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 SPANXN4Q5MJ08 99 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 FAM129CQ86XR2 697 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 C1orf52Q8N6N3 182 aaKnown RBP16.71■□□□□ 0.26
FN1-208ENST00000426059 DNAJB14Q8TBM8 379 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 MIR1-1HGQ9H1L0 117 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 MVB12BQ9H7P6 319 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 NDE1Q9NXR1 346 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 SIT1Q9Y3P8 196 aa16.71■□□□□ 0.26
FN1-208ENST00000426059 PLXND1Q9Y4D7 1925 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 SERTM1A2A2V5 107 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 AKAP10O43572 662 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 B3GALT4O96024 378 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 TNFP01375 233 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 PKLRP30613 574 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 ACTR3P61158 418 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 RPL6Q02878 288 aaKnown RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 DMWDQ09019 674 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 HIST2H2ACQ16777 129 aaPredicted RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 SMU1Q2TAY7 513 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 PAGE2BQ5JRK9 111 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 HIST2H2AA3Q6FI13 130 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 C8orf82Q6P1X6 216 aaPredicted RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 LAS2Q8IYD9 372 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 OR2A1Q8NGT9 310 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 KLHDC7BQ96G42 594 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 VPS13AQ96RL7 3174 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 EML5Q05BV3 1969 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 PRORSD1PA6NEY8 169 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 EEDO75530 441 aaKnown RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 PDGFBP01127 241 aaPredicted RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 WNT1P04628 370 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 HSD17B2P37059 387 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 ACSM2AQ08AH3 577 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 TRMT5Q32P41 509 aaKnown RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 C6orf163Q5TEZ5 329 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 ACSM2BQ68CK6 577 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 VN1R5Q7Z5H4 357 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 ADCK2Q7Z695 626 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 CLDN23Q96B33 292 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 LRRC58Q96CX6 371 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 EHD1Q9H4M9 534 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 TRNAU1APQ9NX07 287 aaKnown RBP16.7■□□□□ 0.26
FN1-208ENST00000426059 KLHL20Q9Y2M5 609 aa16.7■□□□□ 0.26
FN1-208ENST00000426059 CEP192Q8TEP8 1941 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 IGKV1-8A0A0C4DH67 115 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 A6NCN8 305 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 F3P13726 295 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 PEBP1P30086 187 aaKnown RBP16.69■□□□□ 0.26
FN1-208ENST00000426059 RAE1P78406 368 aaKnown RBP16.69■□□□□ 0.26
FN1-208ENST00000426059 ILF3Q12906 894 aaKnown RBP eCLIP16.69■□□□□ 0.26
FN1-208ENST00000426059 CCNIQ14094 377 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 ICE2Q659A1 982 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 ANKRD53Q8N9V6 530 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 OR2L8Q8NGY9 312 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms