RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TCTN3Q6NUS6 607 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 AGTRAPQ6RW13 159 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 CLEC18BQ6UXF7 455 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 MED25Q71SY5 747 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 ZC3HC1Q86WB0 502 aaKnown RBP20.92■□□□□ 0.94
TRAF4-204ENST00000422344 LURAP1LQ8IV03 231 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 CSNK1A1LQ8N752 337 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 TMEM102Q8N9M5 508 aaPredicted RBP20.92■□□□□ 0.94
TRAF4-204ENST00000422344 CLEC18CQ8NCF0 446 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 PTERQ96BW5 349 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 VPS39Q96JC1 886 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 ARL15Q9NXU5 204 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 CDC23Q9UJX2 597 aa20.92■□□□□ 0.94
TRAF4-204ENST00000422344 URI1O94763 535 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-204ENST00000422344 TSPAN12O95859 305 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 ALBP02768 609 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 CCND1P24385 295 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 HRH2P25021 359 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 OR1D4P47884 311 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 PGGT1BP53609 377 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 SLC12A2P55011 1212 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 PHKG1Q16816 387 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 PRMT9Q6P2P2 845 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 MBOAT1Q6ZNC8 495 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 ASB18Q6ZVZ8 466 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 OVCH1Q7RTY7 1134 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 ZNF572Q7Z3I7 529 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-204ENST00000422344 MRGPREQ86SM8 312 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 CCDC25Q86WR0 208 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 SLC25A23Q9BV35 468 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 ATG10Q9H0Y0 220 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 ZNF304Q9HCX3 659 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 SLC22A11Q9NSA0 550 aa20.91■□□□□ 0.94
TRAF4-204ENST00000422344 CUEDC1Q9NWM3 386 aaPredicted RBP20.91■□□□□ 0.94
TRAF4-204ENST00000422344 H7BY64 318 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 TXNDC9O14530 226 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 IGHEP01854 428 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 ENO2P09104 434 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-204ENST00000422344 ITGAXP20702 1163 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 SSTR1P30872 391 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 PGDP52209 483 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 AP1S2P56377 157 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 RELAQ04206 551 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 NAE1Q13564 534 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 CAPN13Q6MZZ7 669 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-204ENST00000422344 C8orf74Q6P047 294 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 C17orf64Q86WR6 236 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 NKAPQ8N5F7 415 aaKnown RBP20.9■□□□□ 0.94
TRAF4-204ENST00000422344 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.9■□□□□ 0.94
TRAF4-204ENST00000422344 ZNF592Q92610 1267 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 PRAP1Q96NZ9 151 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 RHOJQ9H4E5 214 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 WDR54Q9H977 334 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 TMEM184CQ9NVA4 438 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 NXT1Q9UKK6 140 aaKnown RBP20.9■□□□□ 0.94
TRAF4-204ENST00000422344 CDC14AQ9UNH5 594 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 MAU2Q9Y6X3 613 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 SPTBN1Q01082 2364 aaKnown RBP20.9■□□□□ 0.94
TRAF4-204ENST00000422344 FER1L5A0AVI2 2057 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 PCM1Q15154 2024 aa20.9■□□□□ 0.94
TRAF4-204ENST00000422344 HAT1O14929 419 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 CNOT3O75175 753 aaKnown RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 ONECUT2O95948 504 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 ZNF37AP17032 561 aaPredicted RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 NR1D1P20393 614 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 EMP3P54852 163 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 KLRB1Q12918 225 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 PRTGQ2VWP7 1150 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 FAM26EQ8N5C1 309 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 ATL1Q8WXF7 558 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 PDLIM5Q96HC4 596 aaKnown RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 FER1L6-AS2Q96M78 137 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 OR2A5Q96R48 311 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 PHACTR1Q9C0D0 580 aa20.89■□□□□ 0.93
TRAF4-204ENST00000422344 RUVBL1Q9Y265 456 aaKnown RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 PCDHGA9Q9Y5G4 932 aaKnown RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 RP1L1Q8IWN7 2480 aaPredicted RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 SPENQ96T58 3664 aaKnown RBP20.89■□□□□ 0.93
TRAF4-204ENST00000422344 NBPF19A0A087WUL8 3843 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 SEC16AO15027 2179 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 PRPF4O43172 522 aaKnown RBP eCLIP20.88■□□□□ 0.931e-6■□□□□ 9.2
TRAF4-204ENST00000422344 GSTA2P09210 222 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 FBLP22087 321 aaKnown RBP20.88■□□□□ 0.93
TRAF4-204ENST00000422344 TAS2R39P59534 338 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 OCA2Q04671 838 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 NKG7Q16617 165 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 WHAMMP3Q1A5X7 153 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 C3orf62Q6ZUJ4 267 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 COX15Q7KZN9 410 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 PLD3Q8IV08 490 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 TEX19Q8NA77 164 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 CLEC1AQ8NC01 280 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 FBXO25Q8TCJ0 367 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 C10orf90Q96M02 699 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 HAUS8Q9BT25 410 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 SLC26A1Q9H2B4 701 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 SMYD2Q9NRG4 433 aa20.88■□□□□ 0.93
TRAF4-204ENST00000422344 TCRBV9S1A1TA0A576 114 aa20.87■□□□□ 0.93
TRAF4-204ENST00000422344 A6NL46 340 aa20.87■□□□□ 0.93
TRAF4-204ENST00000422344 K7EM74 188 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms