RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MAB21L3Q8N8X9 362 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PPHLN1Q8NEY8 458 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 IPMKQ8NFU5 416 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPPL3Q8TCT6 385 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC22A17Q8WUG5 538 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 DYDC1Q8WWB3 177 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GLMPQ8WWB7 406 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDKL2Q92772 493 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 IGSF8Q969P0 613 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF566Q969W8 418 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 EME1Q96AY2 570 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PABPC5Q96DU9 382 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 STAMBPL1Q96FJ0 436 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRICKLE1Q96MT3 831 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TSGA13Q96PP4 275 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TGS1Q96RS0 853 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRMT1Q99873 361 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 NUDT22Q9BRQ3 303 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PIMREGQ9BSJ6 248 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 NAT9Q9BTE0 207 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 FICDQ9BVA6 458 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 GATA5Q9BWX5 397 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ROPN1BQ9BZX4 212 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 LMAN2LQ9H0V9 348 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 RETREG1Q9H6L5 497 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 EPS8L2Q9H6S3 715 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 CNOT10Q9H9A5 744 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 LRRC40Q9H9A6 602 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIF9Q9HAQ2 790 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ROPN1Q9HAT0 212 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 NT5MQ9NPB1 228 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 RBM22Q9NW64 420 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 BFARQ9NZS9 450 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 TXNDC16Q9P2K2 825 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 PSMC3IPQ9P2W1 217 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 UBA2Q9UBT2 640 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 NEU3Q9UQ49 428 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 B3GNT3Q9Y2A9 372 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF510Q9Y2H8 683 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 AAR2Q9Y312 384 aaKnown RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZFP37Q9Y6Q3 630 aaPredicted RBP3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIAA1549LQ6ZVL6 1849 aa3.77□□□□□ -1.81
HMGB3P20-201ENST00000417997 DENND4AQ7Z401 1863 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF106Q9H2Y7 1883 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIF26AQ9ULI4 1882 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIR2DS5A0A0G2JLQ3 304 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 IQANK1A0A1B0GTG1 560 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SDR42E2A6NKP2 422 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 H0Y626 953 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 H0YGN5 161 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 KIR2DS3K7RE56 304 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 RHODO00212 210 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF197O14709 1029 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TRDMT1O14717 391 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 NPC1O15118 1278 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ALOX15BO15296 676 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SMAD6O43541 496 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TSPAN3O60637 253 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CLDN11O75508 207 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 LUC7L3O95232 432 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 NFATC1O95644 943 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 OLFM2O95897 454 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 POLBP06746 335 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 HNRNPA1P09651 372 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MYOGP15173 224 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 EPCAMP16422 314 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CA4P22748 312 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 HOXA9P31269 272 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MSH2P43246 934 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 P2RX3P56373 397 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAXP61244 160 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAGOHP61326 146 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 RPS24P62847 133 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC7A9P82251 487 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 GNA12Q03113 381 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CDH17Q12864 832 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 HNRNPDQ14103 355 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ERV3-1Q14264 604 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CSHL1Q14406 222 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPARCL1Q14515 664 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SHHQ15465 462 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TEAD2Q15562 447 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MPPE1Q53F39 396 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM133BQ5BKY9 247 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM209BQ5JX69 171 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SPANXN3Q5MJ09 141 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 C9orf50Q5SZB4 431 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM182AQ5T1J6 154 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 UBAP2Q5T6F2 1119 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 LGSNQ5TDP6 509 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 HMBOX1Q6NT76 420 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 LRRC8BQ6P9F7 803 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 KDM7AQ6ZMT4 941 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 LEKR1Q6ZMV7 388 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 C3orf62Q6ZUJ4 267 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF534Q76KX8 674 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 RTL10Q7L3V2 364 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 NLRP14Q86W24 1093 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMC8Q8IU68 726 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms