RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 RXRGP48443 463 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 EIF2B2P49770 351 aaKnown RBP18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 CHIT1Q13231 466 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 AHSA2Q719I0 299 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 RNF175Q8N4F7 328 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 ADAMTS19Q8TE59 1207 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 ASB11Q8WXH4 323 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 TPD52L3Q96J77 140 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 MAGEB10Q96LZ2 347 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 ALOXE3Q9BYJ1 711 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 GFRA2O00451 464 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 NUAK1O60285 661 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 CD36P16671 472 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 NPRL3Q12980 569 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 CAMK2GQ13555 558 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 PDE12Q6L8Q7 609 aaKnown RBP18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 NCCRP1Q6ZVX7 275 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 NEK10Q6ZWH5 1172 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 USP45Q70EL2 814 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 ARL14EPQ8N8R7 260 aaPredicted RBP18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 OR2AP1Q8NGE2 309 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 LGALS12Q96DT0 336 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 PITX2Q99697 317 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 PCDH12Q9NPG4 1184 aa18.41■□□□□ 0.54
TNFRSF8-202ENST00000413146 SERTM1A2A2V5 107 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 PRAMEF4O60810 478 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 C9P02748 559 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 MPC1LP0DKB6 136 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 JUPP14923 745 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 WNT3P56703 355 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 RPP38P78345 283 aaKnown RBP18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 SP140Q13342 867 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 GPNMBQ14956 572 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 PLEKHG6Q3KR16 790 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 PRAMEF9Q5VWM5 478 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 FAHD1Q6P587 224 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 Q6ZNB5 142 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 METTL3Q86U44 580 aaKnown RBP18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 CLECL1Q8IZS7 167 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 FCRL1Q96LA6 429 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 P2RY13Q9BPV8 354 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 OR2A25A4D2G3 310 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 BNIP3LO60238 219 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 GREM1O60565 184 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 ABLIM3O94929 683 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 EFNA1P20827 205 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 TGM1P22735 817 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 CREMQ03060 361 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 CCDC71Q8IV32 467 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 VRK3Q8IV63 474 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 SLC43A3Q8NBI5 491 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 RPL3LQ92901 407 aaKnown RBP18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 ZHX1-C8orf76Q96EF9 292 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 SCRN2Q96FV2 425 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 VN1R3Q9BXE9 311 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 ATG10Q9H0Y0 220 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 SIRT5Q9NXA8 310 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 TRIM17Q9Y577 477 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 TET1Q8NFU7 2136 aa18.4■□□□□ 0.54
TNFRSF8-202ENST00000413146 KRT87PA6NCN2 255 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 CLDN24A6NM45 220 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 EFCAB9A8MZ26 197 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PRRG1O14668 218 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 SCN2BO60939 215 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 WBP4O75554 376 aaKnown RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 LCKP06239 509 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 ZXDBP98169 803 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 CAP1Q01518 475 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 IRF8Q02556 426 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 LMAN2Q12907 356 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 CSTF3Q12996 717 aaKnown RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 FADDQ13158 208 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 DNASE1L3Q13609 305 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 VEZF1Q14119 521 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PLEKHG7Q6ZR37 379 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 GPR155Q7Z3F1 870 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 DNAJB7Q7Z6W7 309 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 TMEM150AQ86TG1 271 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 P3H2Q8IVL5 708 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 OR8J2Q8NGG1 315 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 UBE2FQ969M7 185 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PSD2Q9BQI7 771 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 BTBD2Q9BX70 525 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 SLIRPQ9GZT3 109 aaKnown RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 ABCB8Q9NUT2 735 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 IGLV3-16A0A075B6K0 115 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 TTC34A8MYJ7 566 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 UPK3BL1B0FP48 263 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 UPK3BL2E5RIL1 263 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PCDHGA12O60330 932 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 CNOT3O75175 753 aaKnown RBP18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 TGFBR2P37173 567 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 AP1S2P56377 157 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 CD300CQ08708 224 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 TPGS2Q68CL5 300 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 RFLNAQ6ZTI6 216 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 PAGE2Q7Z2X7 111 aa18.39■□□□□ 0.53
TNFRSF8-202ENST00000413146 DACH2Q96NX9 599 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms