RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 BDKRB2P30411 391 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 HNRNPH3P31942 346 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 STIP1P31948 543 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KIF5BP33176 963 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TIMP3P35625 211 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SERPINB8P50452 374 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PPP5CP53041 499 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 RAD23AP54725 363 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SH3BGRP55822 239 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SEC61BP60468 96 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KCNJ2P63252 427 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 MRPS25P82663 173 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KLC1Q07866 573 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPOCK1Q08629 439 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GAGE1Q13065 139 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GAGE4Q13068 117 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PNOCQ13519 176 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SNTB1Q13884 538 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PPP1R7Q15435 360 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 DLG2Q15700 870 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 UAP1Q16222 522 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 LPAL2Q16609 132 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SYT16Q17RD7 645 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CNPY1Q3B7I2 92 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CRY2Q49AN0 593 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC92Q53HC0 331 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 IGSF11Q5DX21 431 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 NSUN5P2Q63ZY6 315 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KCTD16Q68DU8 428 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 DHRS7BQ6IAN0 325 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 KRT80Q6KB66 452 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 NEPROQ6NW34 567 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 DUS1LQ6P1R4 473 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 WDR59Q6PJI9 974 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 OLFM4Q6UX06 510 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC36A4Q6YBV0 504 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TPRG1Q6ZUI0 275 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 DENND5BQ6ZUT9 1274 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 STXBP4Q6ZWJ1 553 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 G2E3Q7L622 706 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PLPPR4Q7Z2D5 763 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TRPM8Q7Z2W7 1104 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF554Q86TJ5 538 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 NRROSQ86YC3 692 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CHERPQ8IWX8 916 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 LMNTD2Q8IXW0 634 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PCDH20Q8N6Y1 951 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SLC38A9Q8NBW4 561 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC197Q8NCU1 140 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPATA4Q8NEY3 305 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GSDMBQ8TAX9 411 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TAAR8Q969N4 342 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF653Q96CK0 615 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ORAI1Q96D31 301 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CHMP6Q96FZ7 201 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 ZNF274Q96GC6 653 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GRAMD2BQ96HH9 432 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 DHTKD1Q96HY7 919 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 C8orf76Q96K31 380 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC43Q96MW1 224 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 GDAP1L1Q96MZ0 367 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TMEM237Q96Q45 408 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 XPO6Q96QU8 1125 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CGREF1Q99674 301 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CCDC106Q9BWC9 280 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPATA16Q9BXB7 569 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM129AQ9BZQ8 928 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 MIS12Q9H081 205 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SPATC1LQ9H0A9 340 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 RAB17Q9H0T7 212 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 DPH5Q9H2P9 285 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 VCX3BQ9H321 246 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TLE6Q9H808 572 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CNOT10Q9H9A5 744 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 RNPEPL1Q9HAU8 725 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SEBOXQ9HB31 216 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 VCX3AQ9NNX9 186 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM114A2Q9NRY5 505 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SAMSN1Q9NSI8 373 aaKnown RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 RMND1Q9NWS8 449 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 QPCTLQ9NXS2 382 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 AATFQ9NY61 560 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 CRNNQ9UBG3 495 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 RNF14Q9UBS8 474 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 AMACRQ9UHK6 382 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 FAM153AQ9UHL3 310 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TINAGQ9UJW2 476 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 POU2F3Q9UKI9 436 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 MAN1B1Q9UKM7 699 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SNX12Q9UMY4 172 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 SH3GLB1Q9Y371 365 aa2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 TMEM184BQ9Y519 407 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P2-201ENST00000411913 PCDH11XQ9BZA7 1347 aa2.34□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZNF541Q9H0D2 1346 aa2.34□□□□□ -2.04
HMGB3P2-201ENST00000411913 C1orf167Q5SNV9 1468 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 ZFYVE16Q7Z3T8 1539 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 DIP2AQ14689 1571 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 A0A0D9SFI3 127 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 A0A0J9YVX5 310 aa2.33□□□□□ -2.04
HMGB3P2-201ENST00000411913 EIF4E1BA6NMX2 242 aaKnown RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms