RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 E7EQ34 232 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 PPP6CO00743 305 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 HGSO14964 777 aaPredicted RBP14.61□□□□□ -0.07
LSM5-207ENST00000410044 OTCP00480 354 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 PVRP15151 417 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 CXCR2P25025 360 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 HNF4AP41235 474 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 GABRA4P48169 554 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 INHBCP55103 352 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 PKNOX1P55347 436 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 HSD11B2P80365 405 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 IRF8Q02556 426 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 LCP2Q13094 533 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 TRAF3Q13114 568 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 CHIT1Q13231 466 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 DOC2AQ14183 400 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 CHI3L2Q15782 390 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 ISXQ2M1V0 245 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 GGTA1PQ4G0N0 100 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 CFAP157Q5JU67 520 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 RPS27LQ71UM5 84 aaKnown RBP14.61□□□□□ -0.07
LSM5-207ENST00000410044 TMPRSS12Q86WS5 348 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 HOMEZQ8IX15 550 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 LSMEM2Q8N112 164 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 DNAJC22Q8N4W6 341 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 DCBLD1Q8N8Z6 715 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 C19orf47Q8N9M1 422 aaKnown RBP14.61□□□□□ -0.07
LSM5-207ENST00000410044 TRPC4APQ8TEL6 797 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 PTCD3Q96EY7 689 aaKnown RBP14.61□□□□□ -0.07
LSM5-207ENST00000410044 CCDC74BQ96LY2 380 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 PAIP2Q9BPZ3 127 aaKnown RBP14.61□□□□□ -0.07
LSM5-207ENST00000410044 EFCAB11Q9BUY7 163 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 ZNF225Q9UK10 706 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 TSC22D4Q9Y3Q8 395 aa14.61□□□□□ -0.07
LSM5-207ENST00000410044 CEP250Q9BV73 2442 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 TRBC2A0A5B9 178 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 A8MU76 341 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 UBFD1O14562 309 aaKnown RBP14.6□□□□□ -0.07
LSM5-207ENST00000410044 RASSF9O75901 435 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 CLDN9O95484 217 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 FGF4P08620 206 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 EZRP15311 586 aaKnown RBP14.6□□□□□ -0.07
LSM5-207ENST00000410044 CD22P20273 847 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 BGNP21810 368 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 MPSTP25325 297 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 CCNG1P51959 295 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 SH3BP2P78314 561 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 RCN2Q14257 317 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 PUM1Q14671 1186 aaKnown RBP eCLIP14.6□□□□□ -0.07
LSM5-207ENST00000410044 XKR6Q5GH73 641 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 ZC3H12BQ5HYM0 836 aaKnown RBP14.6□□□□□ -0.07
LSM5-207ENST00000410044 CES4AQ5XG92 561 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 GRHL2Q6ISB3 625 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 MILR1Q7Z6M3 343 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 B3GNT8Q7Z7M8 397 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 TMPRSS11BQ86T26 416 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 CHCHD4Q8N4Q1 142 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 OR52B6Q8NGF0 335 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 CKAP2Q8WWK9 683 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 ATP6V1E2Q96A05 226 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 THAP11Q96EK4 314 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 DEPDC7Q96QD5 511 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 AIF1LQ9BQI0 150 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 SYNDIG1Q9H7V2 258 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 MANSC1Q9H8J5 431 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 FAM60AQ9NP50 221 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 PDE7BQ9NP56 450 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 ACSS2Q9NR19 701 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 GEMIN8Q9NWZ8 242 aaKnown RBP14.6□□□□□ -0.07
LSM5-207ENST00000410044 KLHL3Q9UH77 587 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 CLCA2Q9UQC9 943 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.6□□□□□ -0.07
LSM5-207ENST00000410044 KLHL20Q9Y2M5 609 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 PTPRBP23467 1997 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 KNTC1P50748 2209 aa14.6□□□□□ -0.07
LSM5-207ENST00000410044 A0A1B0GTL3 188 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 DCDC2BA2VCK2 349 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 H0YIV9 168 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 MAP3K7O43318 606 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 LCMT2O60294 686 aaKnown RBP14.59□□□□□ -0.07
LSM5-207ENST00000410044 SRPX2O60687 465 aaPredicted RBP14.59□□□□□ -0.07
LSM5-207ENST00000410044 PRAMEF10O60809 474 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 CTSVO60911 334 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 SNNO75324 88 aaPredicted RBP14.59□□□□□ -0.07
LSM5-207ENST00000410044 ESRRBO95718 433 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 JUPP14923 745 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 VARSP26640 1264 aaKnown RBP14.59□□□□□ -0.07
LSM5-207ENST00000410044 ARRB2P32121 409 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 GRK3P35626 688 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 ERVPABLB-1P60509 514 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 ABCE1P61221 599 aaKnown RBP14.59□□□□□ -0.07
LSM5-207ENST00000410044 REEP5Q00765 189 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 STX3Q13277 289 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 CCDC157Q569K6 752 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 ARL13AQ5H913 290 aaPredicted RBP14.59□□□□□ -0.07
LSM5-207ENST00000410044 PAGE2BQ5JRK9 111 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 SNAP47Q5SQN1 464 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 TMTC4Q5T4D3 741 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 HES3Q5TGS1 186 aa14.59□□□□□ -0.07
LSM5-207ENST00000410044 ATG16L1Q676U5 607 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms