RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 GBF1Q92538 1859 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 A8MV72 311 aaPredicted RBP15□□□□□ -0.01
LIMS2-205ENST00000409455 CCRL2O00421 344 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 TLL1O43897 1013 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 NIPSNAP2O75323 286 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 TIMP1P01033 207 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 KRT6AP02538 564 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 KRT6BP04259 564 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 PKMP14618 531 aaKnown RBP15□□□□□ -0.01
LIMS2-205ENST00000409455 RHOQP17081 205 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 GZMMP51124 257 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 LBX1P52954 281 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 MILR1Q7Z6M3 343 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 CCDC190Q86UF4 302 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 C10orf111Q8N326 155 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 TCAIMQ8N3R3 496 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 CLIP3Q96DZ5 547 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 IGSF21Q96ID5 467 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 PHOX2BQ99453 314 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 SLC30A2Q9BRI3 323 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 TTYH2Q9BSA4 534 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 RNF167Q9H6Y7 350 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 IPPKQ9H8X2 491 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 NLE1Q9NVX2 485 aaPredicted RBP15□□□□□ -0.01
LIMS2-205ENST00000409455 ERVK13-1Q9NX77 482 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 PSORS1C1Q9UIG5 152 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 BOLA1Q9Y3E2 137 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
LIMS2-205ENST00000409455 ABHD14A-ACY1A0A1B0GW23 586 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 E5RI56 91 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 H3BQ06 376 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 DIRAS1O95057 198 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 CRYZL1O95825 349 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 EFEMP2O95967 443 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 EPOP01588 193 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 GRK5P34947 590 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ABHD18Q0P651 414 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 PCBP2Q15366 365 aaKnown RBP eCLIP14.99□□□□□ -0.014e-6■■■■□ 25.7
LIMS2-205ENST00000409455 TBRG1Q3YBR2 411 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SOWAHCQ53LP3 525 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SPOUT1Q5T280 376 aaKnown RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 NEK5Q6P3R8 708 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 PLPP6Q8IY26 295 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ST13P5Q8NFI4 369 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 CD200R1Q8TD46 325 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 C1orf74Q96LT6 269 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 CENPOQ9BU64 300 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 REEP1Q9H902 201 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 TBC1D24Q9ULP9 559 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 CFL2Q9Y281 166 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 CCL27Q9Y4X3 112 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 WNT9AO14904 365 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ACRP10323 421 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 CA5AP35218 305 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 GNPDA1P46926 289 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ZNF140P52738 457 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 OLR1P78380 273 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 GALK2Q01415 458 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ZNF235Q14590 738 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SMU1Q2TAY7 513 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 INO80DQ53TQ3 878 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SIGIRRQ6IA17 410 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ERAP2Q6P179 960 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 BEND7Q8N7W2 519 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 PSD4Q8NDX1 1056 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 FLCNQ8NFG4 579 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SERPINB11Q96P15 392 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SDHCQ99643 169 aaPredicted RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 ZBED2Q9BTP6 218 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 SARS2Q9NP81 518 aaKnown RBP14.99□□□□□ -0.01
LIMS2-205ENST00000409455 TMEM248Q9NWD8 314 aa14.99□□□□□ -0.01
LIMS2-205ENST00000409455 KRT87PA6NCN2 255 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 SLC28A1O00337 649 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 AP3D1O14617 1153 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 CDK1P06493 297 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 OR1D2P34982 312 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 PIK3CBP42338 1070 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 C18orf21Q32NC0 220 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-205ENST00000409455 ARMC4Q5T2S8 1044 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 KIAA1841Q6NSI8 718 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 RFPL4BQ6ZWI9 263 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 OR4K2Q8NGD2 314 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 JPH3Q8WXH2 748 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-205ENST00000409455 ZNF689Q96CS4 500 aaPredicted RBP14.98□□□□□ -0.01
LIMS2-205ENST00000409455 HRASLS5Q96KN8 279 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 OR2A14Q96R47 310 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 KCNH6Q9H252 994 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 THUMPD1Q9NXG2 353 aaKnown RBP14.98□□□□□ -0.01
LIMS2-205ENST00000409455 PCDHGA6Q9Y5G7 932 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 CLCA1A8K7I4 914 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 SEMA3DO95025 777 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 TBX18O95935 607 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 YES1P07947 543 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 ITGA2P17301 1181 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 TIE1P35590 1138 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 HNF4AP41235 474 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 RGS6P49758 472 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 HMGCS1Q01581 520 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 IL10RBQ08334 325 aa14.98□□□□□ -0.01
LIMS2-205ENST00000409455 SMARCB1Q12824 385 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms