RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ALYREFQ86V81 257 aaKnown RBP16.19■□□□□ 0.18
SSB-202ENST00000409333 RNF175Q8N4F7 328 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 OR2T11Q8NH01 316 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 WDR20Q8TBZ3 569 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 SLC22A18Q96BI1 424 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 PPM1MQ96MI6 270 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 PRRX2Q99811 253 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 EFCAB11Q9BUY7 163 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 ELOVL6Q9H5J4 265 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 TCF7L2Q9NQB0 619 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 FAM86C1Q9NVL1 165 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 GIMAP2Q9UG22 337 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 SNX6Q9UNH7 406 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 U3KQA8 63 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 MUC6Q6W4X9 2439 aa16.19■□□□□ 0.18
SSB-202ENST00000409333 FEZF1A0PJY2 475 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 CCNDBP1O95273 360 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 KRT6AP02538 564 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 KRT6BP04259 564 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 GLB1P16278 677 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 CMPK1P30085 196 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 CAPZBP47756 277 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 KRT6CP48668 564 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 CCR8P51685 355 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 SF3A2Q15428 464 aaKnown RBP16.18■□□□□ 0.18
SSB-202ENST00000409333 LSM12Q3MHD2 195 aaKnown RBP16.18■□□□□ 0.18
SSB-202ENST00000409333 XKR7Q5GH72 579 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 FRG2Q64ET8 278 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 SPESP1Q6UW49 350 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ADCK2Q7Z695 626 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 CHCHD4Q8N4Q1 142 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 OR4K1Q8NGD4 311 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 SELENOMQ8WWX9 145 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 RILPQ96NA2 401 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 FRG2BQ96QU4 278 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 DPH7Q9BTV6 452 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 EVA1BQ9NVM1 165 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 PADI4Q9UM07 663 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ADAMTS20P59510 1910 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 COL5A1P20908 1838 aaPredicted RBP16.18■□□□□ 0.18
SSB-202ENST00000409333 PROS1P07225 676 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 PCNAP12004 261 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 AMD1P17707 334 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ALDH4A1P30038 563 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 CSNK1G2P78368 415 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ABATP80404 500 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 REEP5Q00765 189 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 LAPTM5Q13571 262 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 PAGE2BQ5JRK9 111 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 MED27Q6P2C8 311 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ANKS4BQ8N8V4 417 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 OR7G3Q8NG95 312 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ATOH1Q92858 354 aaPredicted RBP16.18■□□□□ 0.18
SSB-202ENST00000409333 HEY2Q9UBP5 337 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 APOBEC2Q9Y235 224 aaKnown RBP16.18■□□□□ 0.18
SSB-202ENST00000409333 BTBD3Q9Y2F9 522 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 PCDHGA11Q9Y5H2 935 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 ENTPD2Q9Y5L3 495 aa16.18■□□□□ 0.18
SSB-202ENST00000409333 E9PBE3 544 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 CASC3O15234 703 aaKnown RBP16.17■□□□□ 0.18
SSB-202ENST00000409333 KLHL41O60662 606 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 HOXB3P14651 431 aaPredicted RBP16.17■□□□□ 0.18
SSB-202ENST00000409333 GRIA3P42263 894 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 LSSP48449 732 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 EPHA4P54764 986 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 OR1D5P58170 312 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 IFT88Q13099 833 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 DDX39BQ13838 428 aaKnown RBP16.17■□□□□ 0.18
SSB-202ENST00000409333 NR0B2Q15466 257 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 NKAIN2Q5VXU1 208 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 NXNQ6DKJ4 435 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 ARMC6Q6NXE6 501 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 TMIGD1Q6UXZ0 262 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 RNF165Q6ZSG1 346 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 Q6ZSR9 355 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 ACAD11Q709F0 780 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 PLD3Q8IV08 490 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 LAS2Q8IYD9 372 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 FAM181AQ8N9Y4 354 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 CCT6BQ92526 530 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 MTERF1Q99551 399 aaKnown RBP16.17■□□□□ 0.18
SSB-202ENST00000409333 AIF1LQ9BQI0 150 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 ABCG4Q9H172 646 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 AKTIPQ9H8T0 292 aa16.17■□□□□ 0.18
SSB-202ENST00000409333 ZNF806P0C7X5 589 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 MAGP20916 626 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 PPM1FP49593 454 aaPredicted RBP16.16■□□□□ 0.18
SSB-202ENST00000409333 HMGCS1Q01581 520 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 SPEM2Q0P670 501 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 NR1D2Q14995 579 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 HIST2H2ACQ16777 129 aaPredicted RBP16.16■□□□□ 0.18
SSB-202ENST00000409333 HIST2H2AA3Q6FI13 130 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 ZNF425Q6IV72 752 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 GUSBP11Q6P575 273 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 KLHL35Q6PF15 583 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 LARP4Q71RC2 724 aaKnown RBP eCLIP16.16■□□□□ 0.182e-30■□□□□ 9.8
SSB-202ENST00000409333 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.16■□□□□ 0.18
SSB-202ENST00000409333 KRT78Q8N1N4 520 aa16.16■□□□□ 0.18
SSB-202ENST00000409333 Q8N9G6 341 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms