RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 NXPE1Q8N323 547 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 YIPF6Q96EC8 236 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 SLIRPQ9GZT3 109 aaKnown RBP10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.25□□□□□ -0.771e-10■■■■■ 30
PPP4R1-203ENST00000400556 DSN1Q9H410 356 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 DUSP21Q9H596 190 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 SLC32A1Q9H598 525 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 IL1RAPQ9NPH3 570 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 GPR83Q9NYM4 423 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 SH3BP4Q9P0V3 963 aa10.25□□□□□ -0.77
PPP4R1-203ENST00000400556 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SLC22A1O15245 554 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 TGM1P22735 817 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 CD40LGP29965 261 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 KCNC4Q03721 635 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ABRQ12979 859 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HKDC1Q2TB90 917 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 CCSMST1Q4G0I0 132 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 KDM4DQ6B0I6 523 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 PLEKHG7Q6ZR37 379 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 PTOV1Q86YD1 416 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ENTHD1Q8IYW4 607 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 OR4K1Q8NGD4 311 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SCLYQ96I15 445 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SPATA17Q96L03 361 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 Q96MT0 163 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 CHCHD6Q9BRQ6 235 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 NTMT1Q9BV86 223 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SCHIP1Q9P0W5 487 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ACSL6Q9UKU0 697 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SAMD4AQ9UPU9 718 aaKnown RBP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 TMEM189-UBE2V1I3L0A0 370 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SSX4O60224 188 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 EPN2O95208 641 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HOXD12P35452 270 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SLC19A1P41440 591 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 NR4A2P43354 598 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 NPRL3Q12980 569 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 DGKKQ5KSL6 1271 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ZNF362Q5T0B9 420 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 IER5LQ5T953 404 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 TRAF7Q6Q0C0 670 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ZZZ3Q8IYH5 903 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 SETD9Q8NE22 299 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 CASD1Q96PB1 797 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 APOL4Q9BPW4 351 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 OR51E2Q9H255 320 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 RHCGQ9UBD6 479 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 TRPS1Q9UHF7 1281 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HTR3EA5X5Y0 456 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 TMEM202A6NGA9 273 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 MAGEB17A8MXT2 336 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 J3KTA2 159 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 AIREO43918 545 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 CCNDBP1O95273 360 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HIST1H2AGP0C0S8 130 aaPredicted RBP10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ALOX12P18054 663 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HIST1H2ADP20671 130 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 C5orf22Q49AR2 442 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 C6orf183Q5T699 404 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 ZNF852Q6ZMS4 543 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HEATR4Q86WZ0 1026 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 OR5AK3PQ8NH89 298 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 APH1BQ8WW43 257 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HIST1H2AHQ96KK5 128 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 FEVQ99581 238 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 HIST1H2AJQ99878 128 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 H2AFJQ9BTM1 129 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 RERGLQ9H628 205 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 NAALAD2Q9Y3Q0 740 aa10.24□□□□□ -0.77
PPP4R1-203ENST00000400556 PABPN1LA6NDY0 278 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 FAM227AF5H4B4 570 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 WNT9AO14904 365 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 PCDH7O60245 1069 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 ETHE1O95571 254 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 STSP08842 583 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CD22P20273 847 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 DNAJA1P31689 397 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CD70P32970 193 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 SPAM1P38567 509 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CYP4F8P98187 520 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 IRF8Q02556 426 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 COL9A2Q14055 689 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 KCNJ8Q15842 424 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 KIAA1614Q5VZ46 1190 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 NELL1Q92832 810 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 COPS8Q99627 209 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 B3GNT3Q9Y2A9 372 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CYP7B1O75881 506 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 LHCGRP22888 699 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 PBLDP30039 288 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 TGFBR2P37173 567 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 SERPINB10P48595 397 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CRYBA2P53672 197 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 GANABQ14697 944 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 XKR6Q5GH73 641 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms