RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 IL7P13232 177 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 POU2F1P14859 743 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PAICSP22234 425 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CD86P42081 329 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PIK3CBP42338 1070 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SLC35A2P78381 396 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RPA4Q13156 261 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MFSD14CQ5VZR4 134 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PAQR3Q6TCH7 311 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ASB18Q6ZVZ8 466 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ABHD11Q8NFV4 315 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 GRIN3AQ8TCU5 1115 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 USP7Q93009 1102 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PTERQ96BW5 349 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 C3orf30Q96M34 536 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ACTL8Q9H568 366 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RNF19AQ9NV58 838 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 OPTCQ9UBM4 332 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PCDHGB3Q9Y5G1 929 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 A0A096LPI6 279 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 GNB5O14775 395 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 KPNA5O15131 536 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 OR10H3O60404 316 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SLC2A2P11168 524 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RPS3AP61247 264 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FAM214AQ32MH5 1076 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF789Q5FWF6 425 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SBSNQ6UWP8 590 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SERPINA11Q86U17 422 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CALHM3Q86XJ0 350 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MIB1Q86YT6 1006 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MEIOBQ8N635 442 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CHDHQ8NE62 594 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 OR10T2Q8NGX3 314 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FKBP10Q96AY3 582 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SNX18Q96RF0 628 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MARCH4Q9P2E8 410 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DNMT3BQ9UBC3 853 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 LRFN2Q9ULH4 789 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RNF6Q9Y252 685 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF236Q9UL36 1845 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FAM47E-STBD1D6RA91 191 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 F5H5T6 163 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 STK16O75716 305 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 HAPLN1P10915 354 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ANXA8P13928 327 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 EPB42P16452 691 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 GPC1P35052 558 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RPL3P39023 403 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RORCP51449 518 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RPL6Q02878 288 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 EIF4HQ15056 248 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 HIST2H2ACQ16777 129 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF181Q2M3W8 571 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 PROX2Q3B8N5 592 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 USP39Q53GS9 565 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SNAP47Q5SQN1 464 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 HIST2H2AA3Q6FI13 130 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 LGI2Q8N0V4 545 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SLC37A3Q8NCC5 494 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 C3orf58Q8NDZ4 430 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 NDNFQ8TB73 568 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF419Q96HQ0 510 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FUNDC2Q9BWH2 189 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 NAA50Q9GZZ1 169 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 NTN4Q9HB63 628 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 NMUR1Q9HB89 426 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 DCAF13Q9NV06 445 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CUEDC1Q9NWM3 386 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 GIMAP2Q9UG22 337 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CORO2BQ9UQ03 480 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TNS1Q9HBL0 1735 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CLDN5O00501 218 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CCL22O00626 93 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SLC16A5O15375 505 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 KCNAB2Q13303 367 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MBTPS1Q14703 1052 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 BCL2A1Q16548 175 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RABL3Q5HYI8 236 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 SIRPB2Q5JXA9 342 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 C10orf120Q5SQS8 335 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 RPS27LQ71UM5 84 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CHAC2Q8WUX2 184 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 C11orf24Q96F05 449 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FOPNLQ96NB1 174 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 C11orf16Q9NQ32 467 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 FAM120CQ9NX05 1096 aaKnown RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 EMC3Q9P0I2 261 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ATPIF1Q9UII2 106 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 BACE2Q9Y5Z0 518 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ARL5CA6NH57 179 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 MANSC4A6NHS7 340 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 CENPBD1B2RD01 187 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 BCAS1O75363 584 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-205ENST00000397611 ZBTB7AO95365 584 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 TACR2P21452 398 aa5.3□□□□□ -1.56
PTPRD-205ENST00000397611 UQCRC1P31930 480 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms