RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 ACMSDQ8TDX5 336 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 MZB1Q8WU39 189 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 LPGAT1Q92604 370 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 TLCD1Q96CP7 247 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 CABS1Q96KC9 395 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 OR2A14Q96R47 310 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 GPR22Q99680 433 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 FANCEQ9HB96 536 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 ZBTB20Q9HC78 741 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-202ENST00000396828 DHCR7Q9UBM7 475 aaKnown RBP9.94□□□□□ -0.82
NEDD8-202ENST00000396828 SLC39A10Q9ULF5 831 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 MTO1Q9Y2Z2 717 aaKnown RBP9.94□□□□□ -0.82
NEDD8-202ENST00000396828 HEBP2Q9Y5Z4 205 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 DOPEY1Q5JWR5 2465 aa9.94□□□□□ -0.82
NEDD8-202ENST00000396828 A0A1W2PPM1 405 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 HMX2A2RU54 273 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 C2orf74A8MZ97 194 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 E5RI56 91 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 H3BMM5 538 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 H3BQF6 201 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 MATN2O00339 956 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 QSOX1O00391 747 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 IFRD1O00458 451 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 PRMT5O14744 637 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 F7P08709 466 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 PKMP14618 531 aaKnown RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 RPS3P23396 243 aaKnown RBP eCLIP9.93□□□□□ -0.822e-15■■■□□ 16.4
NEDD8-202ENST00000396828 CRABP2P29373 138 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 FMO4P31512 558 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 HPDP32754 393 aaPredicted RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 HECTD2Q5U5R9 776 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 MLIPQ5VWP3 458 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 PTRHD1Q6GMV3 140 aaKnown RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 EXOC3L1Q86VI1 746 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 KRT222Q8N1A0 295 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 ARFGAP2Q8N6H7 521 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 C19orf47Q8N9M1 422 aaKnown RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 SSC4DQ8WTU2 575 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 INPP5DQ92835 1189 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 TSNARE1Q96NA8 513 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 NDNQ99608 321 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 SMAD5Q99717 465 aaKnown RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 TSSK1BQ9BXA7 367 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 IQCGQ9H095 443 aaKnown RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 MVB12BQ9H7P6 319 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 SYTL2Q9HCH5 934 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 SSU72Q9NP77 194 aaKnown RBP9.93□□□□□ -0.82
NEDD8-202ENST00000396828 SNX15Q9NRS6 342 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 FAM53CQ9NYF3 392 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 GPR83Q9NYM4 423 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 CIDEBQ9UHD4 219 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 GNPTGQ9UJJ9 305 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 SERTAD3Q9UJW9 196 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 CDYLQ9Y232 598 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 KLHL20Q9Y2M5 609 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 VWA7Q9Y334 891 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 ZNF451Q9Y4E5 1061 aa9.93□□□□□ -0.82
NEDD8-202ENST00000396828 MDC1Q14676 2089 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 A0A087X1B8 175 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 SLC5A10A0PJK1 596 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 GOLGA8RI6L899 631 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 COPEO14579 308 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 OR1I1O60431 355 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 DPM1O60762 260 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 VPS26AO75436 327 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 OR2B3O76000 313 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ALDOAP04075 364 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 UMODP07911 640 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 CHRM5P08912 532 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 OR56A5P0C7T3 313 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 CHRM3P20309 590 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ITGAXP20702 1163 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 SKIV2L2P42285 1042 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 CCT5P48643 541 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 RAB10P61026 200 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 PPP2R2AP63151 447 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 RPA4Q13156 261 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 RBM20Q5T481 1227 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 UGT3A1Q6NUS8 523 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 MED25Q71SY5 747 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 MRGPREQ86SM8 312 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 LCA5Q86VQ0 697 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 VRK3Q8IV63 474 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 C4orf33Q8N1A6 199 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 DTWD1Q8N5C7 304 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 CISD2Q8N5K1 135 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 C2orf73Q8N5S3 287 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ZNF655Q8N720 491 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 TMEM102Q8N9M5 508 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 FAM76AQ8TAV0 307 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 PRR7Q8TB68 274 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 ISL2Q96A47 359 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 PNPLA2Q96AD5 504 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 SNRNP40Q96DI7 357 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 TCTN2Q96GX1 697 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 GBP5Q96PP8 586 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 PANX3Q96QZ0 392 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 SELENOSQ9BQE4 189 aa9.92□□□□□ -0.82
NEDD8-202ENST00000396828 AARSD1Q9BTE6 412 aaKnown RBP9.92□□□□□ -0.82
NEDD8-202ENST00000396828 MENTQ9BUN1 341 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms