RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 PIK3R1P27986 724 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 PGM1P36871 562 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 GPR1P46091 355 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 SH3BP2P78314 561 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 HERC3Q15034 1050 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 XKR5Q6UX68 686 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 ADAMTSL4Q6UY14 1074 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 CLYBLQ8N0X4 340 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 CLDN19Q8N6F1 224 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 POU5F2Q8N7G0 328 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 RCBTB1Q8NDN9 531 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 AGAP11Q8TF27 550 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 EXTL1Q92935 676 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 PPP1R36Q96LQ0 422 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 MRGBPQ9NV56 204 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 AKAP7Q9P0M2 348 aaPredicted RBP16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 PRSS21Q9Y6M0 314 aa16.9■□□□□ 0.3
TNFSF13-205ENST00000396545 ZW10O43264 779 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 SLC28A2O43868 658 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 PEX11AO75192 247 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 WT1P19544 449 aaPredicted RBP16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 CCND1P24385 295 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 EEF1DP29692 281 aaKnown RBP16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 CDH13P55290 713 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 PLEKHS1Q5SXH7 462 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 TMEM164Q5U3C3 297 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 ANKS6Q68DC2 871 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 DOK6Q6PKX4 331 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 CYHR1Q6ZMK1 362 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 ADAMTSL2Q86TH1 951 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 LKAAEAR1Q8TD35 194 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 ZNF483Q8TF39 744 aaPredicted RBP16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 CCDC74BQ96LY2 380 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 SARS2Q9NP81 518 aaKnown RBP16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 NUDT4Q9NZJ9 180 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 PCDHB11Q9Y5F2 797 aa16.89■□□□□ 0.3
TNFSF13-205ENST00000396545 SDK2Q58EX2 2172 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 PPM1DO15297 605 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 VEGFDO43915 354 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 SKAP2O75563 359 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 THRAP10827 490 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 CSF2RBP32927 897 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 CLCQ05315 142 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 TMEM115Q12893 351 aaPredicted RBP16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 LCP2Q13094 533 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 SQSTM1Q13501 440 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 KANK2Q63ZY3 851 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 NXNQ6DKJ4 435 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 GPSM1Q86YR5 675 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 MYO1HQ8N1T3 1032 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 RP9Q8TA86 221 aaKnown RBP16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 NSUN5Q96P11 429 aaKnown RBP16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 CATSPER2Q96P56 530 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 OR2M4Q96R27 311 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 ZBTB26Q9HCK0 441 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 TRIM39Q9HCM9 518 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 PLEKHM1Q9Y4G2 1056 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 PCDHGA3Q9Y5H0 932 aa16.89■□□□□ 0.29
TNFSF13-205ENST00000396545 IGHV1OR21-1A0A087WYE8 117 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 GPR89AB7ZAQ6 455 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 PYCARD-AS1I3L0S3 204 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 GPR89BP0CG08 455 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 TSPAN8P19075 237 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 ACTR1BP42025 376 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 MAPK9P45984 424 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 PRLHRP49683 370 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 ACTR1AP61163 376 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 MXRA7P84157 204 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 NFATC3Q12968 1075 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 BIRC2Q13490 618 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 TRA2AQ13595 282 aaKnown RBP eCLIP16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 GTF2H3Q13889 308 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 GBX1Q14549 363 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 TGFBIQ15582 683 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 BCL7AQ4VC05 210 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 NKAIN2Q5VXU1 208 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 NEK10Q6ZWH5 1172 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 SCUBE1Q8IWY4 988 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 OR4D9Q8NGE8 314 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 PMEPA1Q969W9 287 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 MID1IP1Q9NPA3 183 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 STARD5Q9NSY2 213 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 PCTPQ9UKL6 214 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 CNOT6Q9ULM6 557 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 TMEM98Q9Y2Y6 226 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 FIS1Q9Y3D6 152 aa16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 COPG1Q9Y678 874 aaKnown RBP16.88■□□□□ 0.29
TNFSF13-205ENST00000396545 STMND1H3BQB6 276 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 PPP6CO00743 305 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 AZIN1O14977 448 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 AOAHP28039 575 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 PYCR3Q53H96 274 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 CLEC6AQ6EIG7 209 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 SBSNQ6UWP8 590 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 TRIM74Q86UV6 250 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 ULK2Q8IYT8 1036 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 ENDOVQ8N8Q3 282 aaKnown RBP16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 ZSCAN1Q8NBB4 408 aa16.87■□□□□ 0.29
TNFSF13-205ENST00000396545 CFAP61Q8NHU2 1237 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms