RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 RAB30Q15771 203 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 DUOXA1Q1HG43 343 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 C2orf27AQ580R0 203 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SYPL2Q5VXT5 272 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 FBXL22Q6P050 247 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.32□□□□□ -1.56
VPS13C-204ENST00000395898 LINGO2Q7L985 606 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 SLC9B2Q86UD5 537 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TSTD1Q8NFU3 115 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 OR52E4Q8NGH9 312 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF461Q8TAF7 563 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 ZDHHC18Q9NUE0 388 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 TAS2R1Q9NYW7 299 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 RBPJLQ9UBG7 517 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 GMEB1Q9Y692 573 aa5.32□□□□□ -1.56
VPS13C-204ENST00000395898 MATN2O00339 956 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SOX30O94993 753 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PGLSO95336 258 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SLURP2P0DP57 97 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ENGP17813 658 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF234Q14588 700 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ASTE1Q2TB18 679 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 IDNKQ5T6J7 187 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM126BQ8IUX1 230 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ERI1Q8IV48 349 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OR13C4Q8NGS5 318 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SETD6Q8TBK2 473 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OR2AG1Q9H205 316 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TRIM36Q9NQ86 728 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 XPNPEP1Q9NQW7 623 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TMA7Q9Y2S6 64 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PCDHGA10Q9Y5H3 936 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KLHL33A6NCF5 533 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ENTPD6O75354 484 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KLK1P06870 262 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CLCNKAP51800 687 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DNAJB13P59910 316 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CBLBQ13191 982 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ADAM15Q13444 863 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 GANABQ14697 944 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ABCA11PQ4W5N1 156 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SH3PXD2AQ5TCZ1 1133 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CHRDL2Q6WN34 429 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 C12orf40Q86WS4 652 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OR10G2Q8NGC3 310 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 EMID1Q96A84 441 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 RAB7BQ96AH8 199 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KXD1Q9BQD3 176 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SLC2A11Q9BYW1 496 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TELO2Q9Y4R8 837 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 NOX1Q9Y5S8 564 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DNM1LO00429 736 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 NUAK1O60285 661 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CLPXO76031 633 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 BCHEP06276 602 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TYRP14679 529 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF20P17024 532 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TAS2R43P59537 309 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 INCA1Q0VD86 236 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TOR1AIP1Q5JTV8 583 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 LIPJQ5W064 366 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 THOC7Q6I9Y2 204 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OLFML1Q6UWY5 402 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 FRMD7Q6ZUT3 714 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CLIP4Q8N3C7 705 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KCT2Q8NC54 265 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PROKR2Q8NFJ6 384 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OR4C15Q8NGM1 316 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OR9A1PQ8NGU1 263 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 COQ8BQ96D53 544 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 FEM1AQ9BSK4 669 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ADAP2Q9NPF8 381 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ACSS2Q9NR19 701 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PCDHB16Q9NRJ7 776 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TRNAU1APQ9NX07 287 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TVP23BQ9NYZ1 205 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PCDH10Q9P2E7 1040 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 GLS2Q9UI32 602 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SNX10Q9Y5X0 201 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 A8MUI8 341 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PEX12O00623 359 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 AHSGP02765 367 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CD36P16671 472 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 MAPK3P27361 379 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TGFBIQ15582 683 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DECR1Q16698 335 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 MYLK3Q32MK0 819 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 GPR153Q6NV75 609 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TIFABQ6ZNK6 161 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 LYSMD3Q7Z3D4 306 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 THOC6Q86W42 341 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZC3HC1Q86WB0 502 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DCUN1D3Q8IWE4 304 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PYCR2Q96C36 320 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 COL21A1Q96P44 957 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SLC29A3Q9BZD2 475 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SLC22A4Q9H015 551 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CERS4Q9HA82 394 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 NKIRAS2Q9NYR9 191 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TNFRSF10DQ9UBN6 386 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms