RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RHBDF1Q96CC6 855 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 EBF2Q9HAK2 575 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 NEK6Q9HC98 313 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ARMC1Q9NVT9 282 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 EIF2B4Q9UI10 523 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 COMMD3-BMI1R4GMX3 469 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 HSPE1-MOB4S4R3N1 261 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 USF3Q68DE3 2245 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MKI67P46013 3256 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 YKT6O15498 198 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MAN1A2O60476 641 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SEC24AO95486 1093 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CSNK2A2P19784 350 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 OTUD3Q5T2D3 398 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM164Q5U3C3 297 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GRHL2Q6ISB3 625 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 RNF165Q6ZSG1 346 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CDHR3Q6ZTQ4 885 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 EIF3MQ7L2H7 374 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TRIM46Q7Z4K8 759 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ALYREFQ86V81 257 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SHKBP1Q8TBC3 707 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CD200R1Q8TD46 325 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GEMIN6Q8WXD5 167 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 NAT6Q93015 286 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SAMHD1Q9Y3Z3 626 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 GPSM3Q9Y4H4 160 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 MEI4A8MW99 385 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 G3V2L1 256 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PROM1O43490 865 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 COQ9O75208 318 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 TBX10O75333 385 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CLEC3AO75596 197 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SLCO2B1O94956 709 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 OR4F21O95013 312 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 EIF4EBP2Q13542 120 aaPredicted RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PTGES3Q15185 160 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CMPK2Q5EBM0 449 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 LARP4Q71RC2 724 aaKnown RBP eCLIP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF527Q8NB42 609 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 DGCR14Q96DF8 476 aaKnown RBP3.29□□□□□ -1.88
VPS13C-203ENST00000395896 PPM1MQ96MI6 270 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 WDR92Q96MX6 357 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 SEPHS2Q99611 448 aa3.29□□□□□ -1.88
VPS13C-203ENST00000395896 CCDC85CA6NKD9 419 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ARNTLO00327 626 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TP73O15350 636 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 HCRTO43612 131 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CHN2P52757 468 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RANBP3LQ86VV4 465 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM173Q86WV6 379 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZZZ3Q8IYH5 903 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ARL10Q8N8L6 244 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MAGEE2Q8TD90 523 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 GDPD5Q8WTR4 605 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ELSPBP1Q96BH3 223 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 KLHDC7BQ96G42 594 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RIOK2Q9BVS4 552 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MAGIXQ9H6Y5 334 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TRPV4Q9HBA0 871 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 NECTIN3Q9NQS3 549 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DNAJB9Q9UBS3 223 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZDHHC2Q9UIJ5 367 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 AK5Q9Y6K8 562 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PLXNA3P51805 1871 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FOXE1O00358 373 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 H6PDO95479 791 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 NTRK1P04629 796 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CCNA2P20248 432 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 HNRNPA2B1P22626 353 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 HTR1EP28566 365 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 NOS3P29474 1203 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LGALS3BPQ08380 585 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CDC73Q6P1J9 531 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 HEATR4Q86WZ0 1026 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PLXDC1Q8IUK5 500 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MYDGFQ969H8 173 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SLC38A4Q969I6 547 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FBXL8Q96CD0 374 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 REXO4Q9GZR2 422 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CAAP1Q9H8G2 361 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RSL24D1Q9UHA3 163 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 NOBOXO60393 691 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 IL7RP16871 459 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TALDO1P37837 337 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PEX19P40855 299 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ABCG1P45844 678 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RPS9P46781 194 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 BTKQ06187 659 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 COX10Q12887 443 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UAP1L1Q3KQV9 507 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 BROXQ5VW32 411 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PSAPL1Q6NUJ1 521 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZFAND4Q86XD8 727 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PIH1D2Q8WWB5 315 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ING5Q8WYH8 240 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LINC00615Q96LM1 132 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DPYSL5Q9BPU6 564 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C1orf50Q9BV19 199 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms