RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TMEM63AO94886 807 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 RPLP0P05388 317 aaKnown RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 CFHP08603 1231 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF41P51814 821 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 GOLGA7Q7Z5G4 137 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 PDPRQ8NCN5 879 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SLC5A11Q8WWX8 675 aa10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SPATA6Q9NWH7 488 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SPIN1Q9Y657 262 aaPredicted RBP10.12□□□□□ -0.79
COL4A6-203ENST00000394872 SAGE2PA6NJ88 616 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 GRID2O43424 1007 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 OR1I1O60431 355 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 C8orf89P0DMQ9 161 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 GRIA1P42261 906 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 RIN1Q13671 783 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 CDCA2Q69YH5 1023 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 KLHL36Q8N4N3 616 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 NAT8LQ8N9F0 302 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 PHOSPHO1Q8TCT1 267 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 RAD9AQ99638 391 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 P2RY13Q9BPV8 354 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 TMEM109Q9BVC6 243 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 NID2Q14112 1375 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 SNX4O95219 450 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 AZGP1P25311 298 aaKnown RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 CAPZA1P52907 286 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 TMEM139Q8IV31 216 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 KLHL6Q8WZ60 621 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 TOP1MTQ969P6 601 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 LRRC3Q9BY71 257 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF221Q9UK13 617 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 SLC22A2O15244 555 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 OR3A3P47888 321 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 OR3A2P47893 321 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 RAB8AP61006 207 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 SCN1BQ07699 218 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 AAK1Q2M2I8 961 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 ZFP69Q49AA0 526 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 IQCCQ4KMZ1 466 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 MR1Q95460 341 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 KCNC2Q96PR1 638 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 COPS4Q9BT78 406 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 TMEM248Q9NWD8 314 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 OXSMQ9NWU1 459 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 NCDNQ9UBB6 729 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 DKK3Q9UBP4 350 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 RPL36Q9Y3U8 105 aaKnown RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 CICQ96RK0 1608 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 CCNKO75909 580 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 F2P00734 622 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 OAS1P00973 400 aaKnown RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 MTHFD1P11586 935 aaKnown RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 GP1BBP13224 206 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 EDNRAP25101 427 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 EIF1AXP47813 144 aaKnown RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 PER3P56645 1201 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 CREB5Q02930 508 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 SEMA3AQ14563 771 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 DCAF4L2Q8NA75 395 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 ASPNQ9BXN1 380 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 KCNH6Q9H252 994 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 AKTIPQ9H8T0 292 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 FAM221BA6H8Z2 402 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 LOC730098B7Z3J9 87 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 H3BNX3 289 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 FMO3P31513 532 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 ELOCQ15369 112 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 DUOXA1Q1HG43 343 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 TYSND1Q2T9J0 566 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF613Q6PF04 617 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 METTL27Q8N6F8 245 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-203ENST00000394872 NFKBIDQ8NI38 313 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 SLC35F5Q8WV83 523 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 MNTQ99583 582 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF358Q9NW07 568 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 EURLQ9NYK6 297 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 SQORQ9Y6N5 450 aa10.11□□□□□ -0.79
COL4A6-203ENST00000394872 A8MT66 165 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 FOSL2P15408 326 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 POLR2CP19387 275 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PEX2P28328 305 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 RPS13P62277 151 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 FCHO2Q0JRZ9 810 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CPNE8Q86YQ8 564 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 OR9A1PQ8NGU1 263 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GEMIN6Q8WXD5 167 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GRHL1Q9NZI5 618 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PEX16Q9Y5Y5 336 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PCP4L1A6NKN8 68 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PMM2O15305 246 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 HMGN1P05114 100 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CYP1B1Q16678 543 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 LRP10Q7Z4F1 713 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ADGRD2Q7Z7M1 963 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 IGSF21Q96ID5 467 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SMOQ99835 787 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF717Q9BY31 904 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 COQ10BQ9H8M1 238 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms