RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TXNDC16Q9P2K2 825 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 IKZF3Q9UKT9 509 aa29.35■■■□□ 2.29
CMTM4-202ENST00000394106 TLN1Q9Y490 2541 aaKnown RBP29.35■■■□□ 2.29
CMTM4-202ENST00000394106 MDC1Q14676 2089 aaKnown RBP29.34■■■□□ 2.29
CMTM4-202ENST00000394106 TCRBV9S1A1TA0A576 114 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 K7EM74 188 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 PRTGQ2VWP7 1150 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 COX15Q7KZN9 410 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 MRGPREQ86SM8 312 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 PTERQ96BW5 349 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 PDLIM5Q96HC4 596 aaKnown RBP29.34■■■□□ 2.29
CMTM4-202ENST00000394106 C10orf90Q96M02 699 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 OR2A5Q96R48 311 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 SH2B3Q9UQQ2 575 aa29.34■■■□□ 2.29
CMTM4-202ENST00000394106 GUCA1CO95843 209 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 SLC12A2P55011 1212 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 AP1S2P56377 157 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 GPX6P59796 221 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 MUM1Q2TAK8 710 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 HKDC1Q2TB90 917 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 CEP97Q8IW35 865 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 NKAPQ8N5F7 415 aaKnown RBP29.33■■■□□ 2.29
CMTM4-202ENST00000394106 COL26A1Q96A83 441 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 MCMBPQ9BTE3 642 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 PHACTR1Q9C0D0 580 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 TMEM184CQ9NVA4 438 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 RUVBL1Q9Y265 456 aaKnown RBP29.33■■■□□ 2.29
CMTM4-202ENST00000394106 PCSK5Q92824 1860 aa29.33■■■□□ 2.29
CMTM4-202ENST00000394106 ONECUT2O95948 504 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 UMODP07911 640 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 GSTA2P09210 222 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 CCND1P24385 295 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 HRH2P25021 359 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 MAGEA4P43358 317 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 CAPN13Q6MZZ7 669 aaPredicted RBP29.32■■■□□ 2.28
CMTM4-202ENST00000394106 TCTN3Q6NUS6 607 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 C17orf64Q86WR6 236 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 SGPP1Q9BX95 441 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 ZNF304Q9HCX3 659 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 CTSFQ9UBX1 484 aa29.32■■■□□ 2.28
CMTM4-202ENST00000394106 MTO1Q9Y2Z2 717 aaKnown RBP29.32■■■□□ 2.28
CMTM4-202ENST00000394106 NPEPPSL1A6NEC2 478 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 CDC7O00311 574 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 SUV39H1O43463 412 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 ALBP02768 609 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 STATHP02808 62 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 ENO2P09104 434 aaPredicted RBP29.31■■■□□ 2.28
CMTM4-202ENST00000394106 RELAQ04206 551 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 SBSNQ6UWP8 590 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 ATG14Q6ZNE5 492 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 SHISA6Q6ZSJ9 500 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 ASB18Q6ZVZ8 466 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 MED25Q71SY5 747 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 CTAGE3PQ8IX95 158 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 TMEM102Q8N9M5 508 aaPredicted RBP29.31■■■□□ 2.28
CMTM4-202ENST00000394106 PYCR2Q96C36 320 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 IP6K3Q96PC2 410 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 CPNE1Q99829 537 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 SLC25A23Q9BV35 468 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 SOX17Q9H6I2 414 aaPredicted RBP29.31■■■□□ 2.28
CMTM4-202ENST00000394106 WDR54Q9H977 334 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 CAB39LQ9H9S4 337 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 GPAMQ9HCL2 828 aa29.31■■■□□ 2.28
CMTM4-202ENST00000394106 FAM159BA6NKW6 160 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 PYCARD-AS1I3L0S3 204 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 J3QKU1 62 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 PEX12O00623 359 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 RRADP55042 308 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 ILF2Q12905 390 aaKnown RBP29.3■■■□□ 2.28
CMTM4-202ENST00000394106 NKG7Q16617 165 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 ZXDCQ2QGD7 858 aaPredicted RBP29.3■■■□□ 2.28
CMTM4-202ENST00000394106 PRMT9Q6P2P2 845 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 LCTLQ6UWM7 567 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 ANKRD49Q8WVL7 239 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 ATL1Q8WXF7 558 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 FBXL8Q96CD0 374 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 SLC26A1Q9H2B4 701 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 MED13Q9UHV7 2174 aa29.3■■■□□ 2.28
CMTM4-202ENST00000394106 A6NL46 340 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 P2RX6O15547 441 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 CDH1P12830 882 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 EMP3P54852 163 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 CSNK1G2P78368 415 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 POU4F1Q01851 419 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 GUCY2DQ02846 1103 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 COLEC12Q5KU26 742 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 CYS1Q717R9 158 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 PPP1R32Q7Z5V6 425 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 RBBP8Q99708 897 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 HAUS8Q9BT25 410 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 POPDC3Q9HBV1 291 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 LRRC4CQ9HCJ2 640 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 NOVA2Q9UNW9 492 aaKnown RBP29.29■■■□□ 2.28
CMTM4-202ENST00000394106 SPTA1P02549 2419 aa29.29■■■□□ 2.28
CMTM4-202ENST00000394106 TNRC6AQ8NDV7 1962 aaKnown RBP29.28■■■□□ 2.28
CMTM4-202ENST00000394106 TXNDC9O14530 226 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 PDGFAP04085 211 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 NPPBP16860 134 aa29.28■■■□□ 2.28
CMTM4-202ENST00000394106 FBLP22087 321 aaKnown RBP29.28■■■□□ 2.28
CMTM4-202ENST00000394106 GP5P40197 560 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms