RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 SLC13A3Q8WWT9 602 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PCDHB18PQ96TA0 734 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC6A7Q99884 636 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 NDC1Q9BTX1 674 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ASPNQ9BXN1 380 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 POLMQ9NP87 494 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 KCNMB3Q9NPA1 279 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 NANSQ9NR45 359 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CNTN3Q9P232 1028 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 UTS2RQ9UKP6 389 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PCDHGB2Q9Y5G2 931 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ZNF536O15090 1300 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MAP2P11137 1827 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 A0A0J9YVX5 310 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 FAM237AA0A1B0GTK4 181 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 C9J4A7 227 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MATN2O00339 956 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 FBP2O00757 339 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 FSCN2O14926 492 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ARPC2O15144 300 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 VILLO15195 856 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 C8orf89P0DMQ9 161 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PRPS2P11908 318 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RHOQP17081 205 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 LAG3P18627 525 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CSKP41240 450 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 BDKRB1P46663 353 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 NUDT6P53370 316 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RAB4BP61018 213 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MAB21L1Q13394 359 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLBPQ14493 270 aaKnown RBP eCLIP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 TMEM44Q2T9K0 475 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 KHDC1Q4VXA5 237 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ATAD3CQ5T2N8 411 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 TSTD2Q5T7W7 516 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 UBE2UQ5VVX9 321 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 GPAT4Q86UL3 456 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 METTL27Q8N6F8 245 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 NLGN2Q8NFZ4 835 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 S100A16Q96FQ6 103 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MTFR1LQ9H019 292 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ATG5Q9H1Y0 275 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RANBP3Q9H6Z4 567 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 POLE4Q9NR33 117 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RUVBL1Q9Y265 456 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 LOC100130705A0A1B0GUX0 176 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 A0A1B0GVI7 797 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 KLRG2A4D1S0 409 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC38A8A6NNN8 435 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PDLIM1O00151 329 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 EI24O14681 340 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 FARS2O95363 451 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SOX14O95416 240 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RAB36O95755 333 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CDH1P12830 882 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ELNP15502 786 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MATN1P21941 496 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 DCKP27707 260 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SCNN1AP37088 669 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ZNF41P51814 821 aaPredicted RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SMSP52788 366 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CREB5Q02930 508 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC18A2Q05940 514 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CHRFAM7AQ494W8 412 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ANKDD1AQ495B1 522 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 TREML2Q5T2D2 321 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 AMZ2Q86W34 360 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 LGI4Q8N135 537 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 OR10Q1Q8NGQ4 319 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PHOSPHO1Q8TCT1 267 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 HMGB4Q8WW32 186 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 FCAMRQ8WWV6 532 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 RGMAQ96B86 450 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 OTUB2Q96DC9 234 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MSLNLQ96KJ4 702 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PFDN5Q99471 154 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ARHGAP9Q9BRR9 750 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 PCDH10Q9P2E7 1040 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC17A6Q9P2U8 582 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 FZD10Q9ULW2 581 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 DERAQ9Y315 318 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 WASF2Q9Y6W5 498 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 A0A1B0GVM2 712 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 TCRBV7S2A1N4TA0A589 114 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 TNFRSF10BO14763 440 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MATN3O15232 486 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 NPHS1O60500 1241 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 B4GALT2O60909 372 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 SLC16A8O95907 504 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 JUNP05412 331 aaKnown RBP5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ACP5P13686 325 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 VIPR1P32241 457 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 CHRNA4P43681 627 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MMP14P50281 582 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 MERTKQ12866 999 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 ARHGAP40Q5TG30 622 aa5.54□□□□□ -1.52
GAPVD1-206ENST00000394104 EIF5AL1Q6IS14 154 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms